RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 APOBEC3AP31941 199 aaPredicted RBP11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 ZNF525Q8N782 197 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 ARPC1AQ92747 370 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 LINC01587Q99440 93 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 SFXN3Q9BWM7 321 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 NPIPB4C9JG80 1138 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 H0YIZ8 118 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 HGFACQ04756 655 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 SPRR3Q9UBC9 169 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 SIPA1L1O43166 1804 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 TM2D1Q9BX74 207 aa11.39□□□□□ -0.59
TGFBR3-201ENST00000212355 XIRP1Q702N8 1843 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 SFTPCP11686 197 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 BMPERQ8N8U9 685 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 RPP21Q9H633 154 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 FOXF2Q12947 444 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 RIPPLY2Q5TAB7 128 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 MRPL32Q9BYC8 188 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 TNFRSF18Q9Y5U5 241 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 LY6G6FQ5SQ64 297 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 NUDT10Q8NFP7 164 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 KBTBD11-OT1A0A1B0GTJ5 212 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 KLRD1Q13241 179 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 SRSF6Q13247 344 aaKnown RBP11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 TUBA4BQ9H853 241 aa11.38□□□□□ -0.59
TGFBR3-201ENST00000212355 H3BUT2 72 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 ASIPP42127 132 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 C10orf55Q5SWW7 151 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 ZNF324BQ6AW86 544 aaPredicted RBP11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 TMEM219Q86XT9 240 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 PAQR4Q8N4S7 273 aaPredicted RBP11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 PQLC2LA1A4F0 135 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 CIRBPQ14011 172 aaKnown RBP11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
TGFBR3-201ENST00000212355 CD7P09564 240 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 IGFBP3P17936 291 aaPredicted RBP11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 COLCA1Q6ZS62 124 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 C1QTNF5Q9BXJ0 243 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 DNM1P46Q6ZS02 220 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 B9A039 149 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 MLNRO43193 412 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 EFEMP2O95967 443 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 JOSD1Q15040 202 aaPredicted RBP11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 WBP1Q96G27 269 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
TGFBR3-201ENST00000212355 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 LINC00114Q6XXX2 140 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 FER1L6-AS1Q8NA97 138 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 SEMA5BQ9P283 1151 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 A8MXK9 166 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 LILRA1O75019 489 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 LTBRP36941 435 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 CRIM1Q9NZV1 1036 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 APC2O95996 2303 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 CEP290O15078 2479 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 OR11H12B2RN74 326 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 CXCL1P09341 107 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 OR11H1Q8NG94 326 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 OR11H2Q8NH07 326 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 MED12Q93074 2177 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 NAPSAO96009 420 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 RPL15P61313 204 aaKnown RBP11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 COX5BP10606 129 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
TGFBR3-201ENST00000212355 LOC390937A0A1W2PQ73 354 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 NCR2O95944 276 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 TIMM23BQ5SRD1 257 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 GLRXP35754 106 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 FOXL1Q12952 345 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 KIF26BQ2KJY2 2108 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 F8VVB4 439 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 F8VWA3 439 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 NDUFA2O43678 99 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 MEGF9Q9H1U4 602 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 TMEM50AO95807 157 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 DNAL4O96015 105 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 OCC1Q8TAD7 63 aa11.34□□□□□ -0.59
TGFBR3-201ENST00000212355 CFHR5Q9BXR6 569 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms