RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 MAP1AP78559 2803 aaPredicted RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 SPTAN1Q13813 2472 aaKnown RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 HELTA6NFD8 242 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 OOEPA6NGQ2 149 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 RNF212BA8MTL3 300 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 M0QZK8 103 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 ZNF324O75467 553 aaPredicted RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 IGKV1-16P04430 117 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 LINC00614P0C842 121 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 LINC00869P0C866 280 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 ESDP10768 282 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 IGLL1P15814 213 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 TSPOP30536 169 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 ARR3P36575 388 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 CAMPP49913 170 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 ZNF138P52744 262 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 FOXA3P55318 350 aaPredicted RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 RANP62826 216 aaKnown RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 PAFAH1B2P68402 229 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 PLGLB1Q02325 96 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 ACP7Q6ZNF0 438 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 C19orf35Q6ZS72 473 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 MOB1BQ7L9L4 216 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 LINC00470Q9BZP3 86 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 SLC45A2Q9UMX9 530 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 TCF19Q9Y242 345 aa4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 RAI1Q7Z5J4 1906 aaPredicted RBP4.78□□□□□ -1.64
CEACAM1-201ENST00000161559 C20orf202A1L168 122 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 E7EUB6 86 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 MMP23AO75900 390 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 IGHV1-2P23083 117 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 GNG5P63218 68 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 SLC35E4Q6ICL7 350 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 TRIB1Q96RU8 372 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 RNF2Q99496 336 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 ZNF586Q9NXT0 402 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 CLCF1Q9UBD9 225 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 CBY1Q9Y3M2 126 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 CSMD2Q7Z408 3487 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 hDV102S1A0JD36 115 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 NTN3O00634 580 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 SNAI2O43623 268 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 APELAP0DMC3 54 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 CX3CL1P78423 397 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 Q0VG73 95 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 TCF24Q7RTU0 167 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 C18orf32Q8TCD1 76 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 RAB1CQ92928 201 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 ZPBPQ9BS86 351 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 IGKV1D-17A0A075B6S4 117 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 SRRM4A7MD48 611 aaKnown RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 KLK10O43240 276 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 PRB3Q04118 309 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 AARDQ4LEZ3 155 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 MORN2Q502X0 79 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 RNASEKQ6P5S7 137 aaKnown RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 C6orf15Q6UXA7 325 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 SPACA3Q8IXA5 215 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 OR4F17Q8NGA8 305 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 RND1Q92730 232 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 HES4Q9HCC6 221 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 BOKQ9UMX3 212 aaPredicted RBP4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 RPH3ALQ9UNE2 315 aa4.77□□□□□ -1.65
CEACAM1-201ENST00000161559 CD59P13987 128 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 MEOX1P50221 254 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 TBC1D28Q2M2D7 210 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 NRN1LQ496H8 165 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 IBA57Q5T440 356 aaKnown RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 OR4A47Q6IF82 309 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 TEPPQ6URK8 271 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 ZNF439Q8NDP4 499 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 SLC24A4Q8NFF2 622 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 OR4B1Q8NGF8 309 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 OR2T6Q8NHC8 308 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 NABP2Q9BQ15 211 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 SAA2-SAA4A0A096LPE2 208 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 SAA2P0DJI9 122 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 USF1P22415 310 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 CA7P43166 264 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 MFAP2P55001 183 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 LOXL3P58215 753 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 SRSF6Q13247 344 aaKnown RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 MPV17L2Q567V2 206 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 TRAT1Q6PIZ9 186 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 LINC00322Q6ZN03 302 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 CNEP1R1Q8N9A8 125 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 LRRC29Q8WV35 223 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 TAAR6Q96RI8 345 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 FAM173AQ9BQD7 235 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 GNB1LQ9BYB4 327 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 UQCR10Q9UDW1 63 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 COL27A1Q8IZC6 1860 aaPredicted RBP4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 OR2T8A6NH00 312 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 C9orf172C9J069 976 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 ISLRO14498 428 aa4.76□□□□□ -1.65
CEACAM1-201ENST00000161559 CDX4O14627 284 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms