RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 TOMM40O96008 361 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 OR10J4P0C629 311 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 TNFSF4P23510 183 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 TMPRSS3P57727 454 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 SPATA45Q537H7 98 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 ASPHD1Q5U4P2 390 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.02
CX3CL1-201ENST00000006053 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 C9JCJ5 164 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF253O75346 499 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 CECR9P0C854 216 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 OR4A47Q6IF82 309 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 TRAT1Q6PIZ9 186 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 CHODLQ9H9P2 273 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 JPT1Q9UK76 154 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 CADP27708 2225 aa8.65□□□□□ -1.03
CX3CL1-201ENST00000006053 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM90A9PA6NNJ1 464 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 J3KRW8 73 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 GNG7O60262 68 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 WISP2O76076 250 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 GPX1P07203 203 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 ESDP10768 282 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 COMPP49747 757 aaPredicted RBP8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 Q0VG73 95 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 TIGITQ495A1 244 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 PEAR1Q5VY43 1037 aaPredicted RBP8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 OR4S2Q8NH73 311 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 RCHY1Q96PM5 261 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 NRN1Q9NPD7 142 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 TNCP24821 2201 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 YLPM1P49750 1951 aaKnown RBP8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 C15orf61A6NNL5 157 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 C21orf140B9A014 251 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 NTF3P20783 257 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 SRIP30626 198 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM214BQ7L5A3 538 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 NHLRC2Q8NBF2 726 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 TRAV30A0A087WSZ9 112 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 HSPE1P61604 102 aaKnown RBP8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM201AQ5SY85 155 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 Q6ZT83 130 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 FER1L6-AS2Q96M78 137 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 UQCR10Q9UDW1 63 aa8.64□□□□□ -1.03
CX3CL1-201ENST00000006053 PTPRBP23467 1997 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 SPAARA0A1B0GVQ0 90 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 CA1P00915 261 aaPredicted RBP8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 PPP1R35Q8TAP8 253 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 MGST3O14880 152 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 SAP30O75446 220 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 LOXL3P58215 753 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 STARD4Q96DR4 205 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 SFXN3Q9BWM7 321 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 WNT10AQ9GZT5 417 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 CALYQ9NYX4 217 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 SLC45A2Q9UMX9 530 aa8.63□□□□□ -1.03
CX3CL1-201ENST00000006053 TRGV8A0A0C4DH27 118 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 IGKV3-15P01624 115 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 LINC00869P0C866 280 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 CX3CL1P78423 397 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 MLANAQ16655 118 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 DEFB124Q8NES8 71 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 OR51B2Q9Y5P1 312 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SAA2-SAA4A0A096LPE2 208 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 TRBV9A0A0B4J1U6 114 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 A0A1W2PS18 150 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SAA2P0DJI9 122 aaPredicted RBP8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 AREGP15514 252 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR20EP86478 221 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR20CP86479 221 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR20DP86480 221 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR20BP86481 221 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 PRR20AP86496 221 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SCGB2A2Q13296 93 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 TMEM136Q6ZRR5 245 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 SSBP3Q9BWW4 388 aaPredicted RBP8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 TMEM167BQ9NRX6 74 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 ZNF83P51522 516 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 CT45A1Q5HYN5 189 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 IBA57Q5T440 356 aaKnown RBP8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 MOGAT3Q86VF5 341 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 TMEM178AQ8NBL3 297 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 CT45A3Q8NHU0 189 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 KCNS1Q96KK3 526 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
CX3CL1-201ENST00000006053 J3QR06 171 aa8.61□□□□□ -1.03
CX3CL1-201ENST00000006053 MMP23AO75900 390 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms