RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Slc34a1Q60825 637 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Commd9Q8K2Q0 198 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 HrgQ9ESB3 525 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Kcnip1Q9JJ57 227 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Suclg1Q9WUM5 346 aaKnown RBP9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm438B1ASB3 393 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tnfrsf17O88472 185 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cd74P04441 279 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 CapgP24452 352 aaKnown RBP9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Pcbd1P61458 104 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Lrrc30Q3UV48 300 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Slc25a31Q3V132 320 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Slc25a26Q5U680 274 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nmes1Q810Q5 83 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 TecrlQ8BFZ1 361 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Q8BTG6 205 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Degs2Q8R2F2 323 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 TirapQ99JY1 241 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ndufb8Q9D6J5 186 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm10778A0A087WNP5 499 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm42543A0A0G2JET4 117 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fcrl6A1YIY0 268 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm20821J3QPJ2 227 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 mt-Co3P00416 261 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cfhr1Q61406 343 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zic4Q61467 341 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 SspnQ62147 216 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 2810408A11RikQ6NSU2 435 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dppa1Q810Y7 116 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nup35Q8R4R6 325 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Slc50a1Q9CXK4 221 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dda1Q9D9Z5 102 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 PkdrejQ9Z0T6 2126 aa9.76□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dock4P59764 1978 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp708F8VPP0 541 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 EnamO55196 1274 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fcer1gP20491 86 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Spam1P48794 512 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nkain3Q3URJ8 181 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem256Q5F285 113 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm21943Q5FWD5 227 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Prss45Q8K4I7 317 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Abhd5Q9DBL9 351 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Vmn1r44Q9EQ47 310 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Trbv29A0A0G2LB96 114 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 CryabP23927 175 aaKnown RBP9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cib3Q0P523 160 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nr2c2apQ3TV70 140 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Klf3Q60980 344 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr907Q7TRC7 310 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr167Q8VGJ5 312 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fam103a1Q9CQY2 119 aaKnown RBP9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm14325A2AW67 498 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cd7P50283 210 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gpr183Q3U6B2 357 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Mbnl3Q8R003 342 aaKnown RBP9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 D1Ertd622eQ8VEB3 207 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Rab40cQ8VHQ4 281 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Nus1Q99LJ8 297 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Lmntd1Q9D4C1 413 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Eif3iQ9QZD9 325 aaKnown RBP9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1320A2AHM8 319 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr624F8VQI7 308 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm15292L7N231 93 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 P01654 111 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 P01656 111 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 P03977 111 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Wnt5aP22725 380 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Htr5aP30966 357 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 HhexP43120 271 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Sox15P43267 231 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Slc35b1P97858 322 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Thbs3Q05895 956 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Psmb6Q60692 238 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Rab35Q6PHN9 201 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Wbp1lQ8BGW2 348 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1446Q8VFX4 308 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr206Q8VGP9 306 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 PyyQ9EPS2 98 aa9.75□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm14408E9Q6B9 136 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1471F6QVZ8 314 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Fkbp2P45878 140 aaKnown RBP9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 FmodP50608 376 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Trat1Q3UU67 187 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1396Q7TQS8 315 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1339Q8VGB1 315 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr980Q8VH08 310 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Smdt1Q9DB10 107 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cxcl15Q9WVL7 167 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 SonQ9QX47 2444 aaKnown RBP9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 GzmfP08883 248 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 GlulP15105 373 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ly6dP35459 127 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Dnase2P56542 353 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 UcnP81615 122 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Defb46Q4QY34 57 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Pramel5Q7TPY4 500 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ppp1r14dQ7TT52 146 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmprss11fQ8BHM9 439 aa9.74□□□□□ -0.85
Topbp1-201ENSMUST00000035164 EogtQ8BYW9 527 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms