RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 C2orf50Q96LR7 162 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 OR2A7Q96R45 310 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 CLCC1Q96S66 551 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 RNF5Q99942 180 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 FBXL15Q9H469 300 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 A0A1B0GU03 582 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 RRHO14718 337 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 ACTL6BO94805 426 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 KBTBD11O94819 623 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 IGLV2-23P01705 113 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 SLC25A6P12236 298 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 HLA-GP17693 338 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 CYCSP99999 105 aaKnown RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 KIAA0141Q14154 515 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 POU2AF1Q16633 256 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 LRRC37A5PQ49AS3 106 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 FAM71E2Q8N5Q1 922 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 OR4A5Q8NH83 315 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 MYOZ3Q8TDC0 251 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 CHAC2Q8WUX2 184 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 DCUN1D4Q92564 292 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 RASL11BQ9BPW5 248 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 RANGRFQ9HD47 186 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 TPSG1Q9NRR2 321 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-222ENST00000641587 BET1LQ9NYM9 111 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 TNCP24821 2201 aa7.74□□□□□ -1.17
PHGDH-222ENST00000641587 ALMS1Q8TCU4 4167 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 TRAV3A0A0B4J244 114 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 C15orf61A6NNL5 157 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 G3V318 75 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 I3L521 148 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 WRBO00258 174 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 UPK2O00526 184 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 IFNA17P01571 189 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 P0C879 139 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 SLURP1P55000 103 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 RAP2BP61225 183 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
PHGDH-222ENST00000641587 ZNF616Q08AN1 781 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 TNXAQ16473 311 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 C5orf64Q2M2E5 130 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 Q6ZRM9 215 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 HAPLN4Q86UW8 402 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 TEX45Q8NA69 505 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 OR8H1Q8NGG4 311 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 OR1N2Q8NGR9 330 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 TMEM167AQ8TBQ9 72 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 ABHD5Q8WTS1 349 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 CITED4Q96RK1 184 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 HINT2Q9BX68 163 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 QTRT1Q9BXR0 403 aaKnown RBP7.73□□□□□ -1.17
PHGDH-222ENST00000641587 GON7Q9BXV9 100 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 NMES1Q9C002 83 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 LSM5Q9Y4Y9 91 aaKnown RBP7.73□□□□□ -1.17
PHGDH-222ENST00000641587 OR51B2Q9Y5P1 312 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 WSB1Q9Y6I7 421 aa7.73□□□□□ -1.17
PHGDH-222ENST00000641587 CEBPZOSA8MTT3 80 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ST8SIA3O43173 380 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 SAP30O75446 220 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 NDUFA3O95167 84 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 CNIH1O95406 144 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 OR8U8P0C7N1 319 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 GP9P14770 177 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 NKX2-1P43699 371 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 HOXA1P49639 335 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 INSL3P51460 131 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 PJVKQ0ZLH3 352 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 PRSS8Q16651 343 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 SPINK9Q5DT21 86 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 PPP1R27Q86WC6 154 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 MMD2Q8IY49 270 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ZNF491Q8N8L2 437 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 NPBQ8NG41 125 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 OR4D5Q8NGN0 318 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 OR2T35Q8NGX2 323 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ASB13Q8WXK3 278 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 DLX4Q92988 240 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 FYTTD1Q96QD9 318 aaKnown RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 COMMD5Q9GZQ3 224 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 MAGT1Q9H0U3 335 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ZMAT4Q9H898 229 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ZNF430Q9H8G1 570 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 ENY2Q9NPA8 101 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 FKBP11Q9NYL4 201 aa7.72□□□□□ -1.17
PHGDH-222ENST00000641587 FOXA2Q9Y261 457 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-222ENST00000641587 SMLR1H3BR10 107 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 OVOL1O14753 267 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 ATP6V0E1O15342 81 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 SSSCA1O60232 199 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 MED6O75586 246 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 CA2P00918 260 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 MBPP02686 304 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-222ENST00000641587 RLN2P04090 185 aa7.71□□□□□ -1.18
PHGDH-222ENST00000641587 IGF1P05019 195 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms