RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 NIPSNAP3BQ9BS92 247 aa5.64□□□□□ -1.51
SCARB2-226ENST00000640916 DCUN1D5Q9BTE7 237 aa5.64□□□□□ -1.51
SCARB2-226ENST00000640916 C12orf4Q9NQ89 552 aa5.64□□□□□ -1.51
SCARB2-226ENST00000640916 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
SCARB2-226ENST00000640916 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
SCARB2-226ENST00000640916 TRAV14DV4A0A0A6YYC5 116 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 TRAV3A0A0B4J244 114 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 HLA-GP17693 338 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 PI3P19957 117 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 EMP1P54849 157 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 PAFAH1B2P68402 229 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 HAMPP81172 84 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 FLOT2Q14254 428 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 ZNF674Q2M3X9 581 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 ACTL10Q5JWF8 245 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 C1orf100Q5SVJ3 147 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 H1FOOQ8IZA3 346 aaPredicted RBP5.63□□□□□ -1.51
SCARB2-226ENST00000640916 ZFP41Q8N8Y5 198 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 C15orf53Q8NAA6 179 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 ZNF485Q8NCK3 441 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 CCDC197Q8NCU1 140 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 OR10J5Q8NHC4 309 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 VSTM2AQ8TAG5 236 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 RNF125Q96EQ8 232 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 C16orf92Q96LL3 132 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 CMTM3Q96MX0 182 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 CMSS1Q9BQ75 279 aaKnown RBP5.63□□□□□ -1.51
SCARB2-226ENST00000640916 PECRQ9BY49 303 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 FGF20Q9NP95 211 aaPredicted RBP5.63□□□□□ -1.51
SCARB2-226ENST00000640916 BABAM2Q9NXR7 383 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 C21orf62Q9NYP8 219 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 THYN1Q9P016 225 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 XCL2Q9UBD3 114 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 KCNK7Q9Y2U2 307 aa5.63□□□□□ -1.51
SCARB2-226ENST00000640916 IGHV3-66A0A0C4DH42 116 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 NPIPB6E9PJ23 425 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 DNASE2O00115 360 aaPredicted RBP5.62□□□□□ -1.51
SCARB2-226ENST00000640916 DIRAS3O95661 229 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 SERPINE2P07093 398 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 UBBP0CG47 229 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 CRHBPP24387 322 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 DLK1P80370 383 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 WT1-ASQ06250 92 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 PLA2G7Q13093 441 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 ICAM4Q14773 271 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 BAK1Q16611 211 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 WDR73Q6P4I2 378 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 TEPPQ6URK8 271 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 KCTD9Q7L273 389 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 LRRTM1Q86UE6 522 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 GDPD1Q8N9F7 314 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 DUSP18Q8NEJ0 188 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 GRAMD2BQ96HH9 432 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 ARHGAP5-AS1Q96IT6 56 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 RAB40CQ96S21 281 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 ATG101Q9BSB4 218 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 Q9H8V8 135 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 POMPQ9Y244 141 aa5.62□□□□□ -1.51
SCARB2-226ENST00000640916 IGKV1D-8A0A087WSZ0 117 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 TMEM189A5PLL7 270 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 SNTNA6NMZ2 147 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 ST8SIA3O43173 380 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 CD5P06127 495 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 CDK1P06493 297 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 ZNF688P0C7X2 276 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 INSL4Q14641 139 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 TIMM50Q3ZCQ8 353 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 SLC25A24Q6NUK1 477 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 LYSMD2Q8IV50 215 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 UBAC2Q8NBM4 344 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 RHOXF1Q8NHV9 184 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 APH1BQ8WW43 257 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 MAFIPQ8WZ33 124 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 DNAH8Q96JB1 4490 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 GPHA2Q96T91 129 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 SRSF8Q9BRL6 282 aaKnown RBP5.61□□□□□ -1.51
SCARB2-226ENST00000640916 NXF2Q9GZY0 626 aaKnown RBP5.61□□□□□ -1.51
SCARB2-226ENST00000640916 Q9H3A6 140 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
SCARB2-226ENST00000640916 BET1LQ9NYM9 111 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 CLEC2DQ9UHP7 191 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 OAZ3Q9UMX2 235 aa5.61□□□□□ -1.51
SCARB2-226ENST00000640916 RBMX2Q9Y388 322 aaKnown RBP5.61□□□□□ -1.51
SCARB2-226ENST00000640916 RBM7Q9Y580 266 aaKnown RBP5.61□□□□□ -1.51
SCARB2-226ENST00000640916 IGKV1D-13A0A0B4J2D9 117 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 SMIM9A6NGZ8 99 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 SAC3D1A6NKF1 404 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 J3QRK9 145 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 YIF1AO95070 293 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 FCGR3AP08637 254 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 IGKV1-13P0DP09 117 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 MAPK3P27361 379 aaPredicted RBP5.6□□□□□ -1.51
SCARB2-226ENST00000640916 TAS2R43P59537 309 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 RELQ04864 619 aaPredicted RBP5.6□□□□□ -1.51
SCARB2-226ENST00000640916 ZIK1Q3SY52 487 aaPredicted RBP5.6□□□□□ -1.51
SCARB2-226ENST00000640916 Q56UQ5 140 aa5.6□□□□□ -1.51
SCARB2-226ENST00000640916 ZNF773Q6PK81 442 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms