RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ANKRD11Q6UB99 2663 aaPredicted RBP11.98□□□□□ -0.49
SCARB2-221ENST00000640341 HELTA6NFD8 242 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 SRRM4A7MD48 611 aaKnown RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 ZNF891A8MT65 544 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 PLAUP00749 431 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 TAS2R60P59551 318 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 PRB3Q04118 309 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 FOXL1Q12952 345 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 KBTBD11-OT1A0A1B0GTJ5 212 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 PDLIM4P50479 330 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 KRTDAPP60985 99 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 ZNF474Q6S9Z5 364 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 LINC00479Q96M42 142 aa11.97□□□□□ -0.49
SCARB2-221ENST00000640341 POLR3KQ9Y2Y1 108 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-221ENST00000640341 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 PRSS46E5RG02 174 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 CHRNB4P30926 498 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 SEM1Q6ZVN7 128 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 EAF1Q96JC9 268 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-221ENST00000640341 SSBP3Q9BWW4 388 aaPredicted RBP11.96□□□□□ -0.49
SCARB2-221ENST00000640341 PMCHP20382 165 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 RAB7AP51149 207 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 SELENOVP59797 346 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 GUSBP1Q15486 140 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 ZNF124Q15973 351 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 PRR27Q6MZM9 219 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 H1FXQ92522 213 aaKnown RBP11.96□□□□□ -0.49
SCARB2-221ENST00000640341 RPH3ALQ9UNE2 315 aa11.96□□□□□ -0.49
SCARB2-221ENST00000640341 ZGRF1Q86YA3 2104 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 IGKV1OR2-108A0A075B7D4 117 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 TCAPO15273 167 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 FTH1P19P0C7X4 201 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 CDKN1AP38936 164 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 RPEL1Q2QD12 228 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 C1orf162Q8NEQ5 155 aaPredicted RBP11.96□□□□□ -0.5
SCARB2-221ENST00000640341 PARD6AQ9NPB6 346 aa11.96□□□□□ -0.5
SCARB2-221ENST00000640341 LSM4Q9Y4Z0 139 aaKnown RBP11.96□□□□□ -0.5
SCARB2-221ENST00000640341 ZNF318Q5VUA4 2279 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 RELNP78509 3460 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 MKRN2OSH3BPM6 223 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 CD99P14209 185 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 CCL3L1P16619 93 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 OR2T6Q8NHC8 308 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 AKAP13Q12802 2813 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 SPTBN4Q9H254 2564 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 PRB4P10163 310 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-221ENST00000640341 CASP6P55212 293 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 C10orf55Q5SWW7 151 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 ST6GALNAC3Q8NDV1 305 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 ZCCHC14Q8WYQ9 949 aaKnown RBP11.95□□□□□ -0.5
SCARB2-221ENST00000640341 IL36BQ9NZH7 164 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 RNF7Q9UBF6 113 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 ABCA4P78363 2273 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 F2RL2O00254 374 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 SNHG12Q9BXW3 62 aa11.95□□□□□ -0.5
SCARB2-221ENST00000640341 APC2O95996 2303 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 IRF2P14316 349 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 TIGITQ495A1 244 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 Q6ZWC4 215 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 OR52E5Q8NH55 327 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 DDB2Q92466 427 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 BTF3L4Q96K17 158 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 IGHV3-21A0A0B4J1V1 117 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 REG1AP05451 166 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 TPPP2P59282 170 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 HARBI1Q96MB7 349 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 TMEM14BQ9NUH8 114 aa11.94□□□□□ -0.5
SCARB2-221ENST00000640341 SAA1P0DJI8 122 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-221ENST00000640341 NTF3P20783 257 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 RTL8BQ17RB0 113 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 ZADH2Q8N4Q0 377 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 IL19Q9UHD0 177 aa11.93□□□□□ -0.5
SCARB2-221ENST00000640341 CT45A6P0DMU7 189 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 CT45A5P0DMU8 189 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 CT45A7P0DMV0 189 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 PYYP10082 97 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 GLRXP35754 106 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 UBE2L3P68036 154 aaKnown RBP11.92□□□□□ -0.5
SCARB2-221ENST00000640341 CCL17Q92583 94 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 GGTLC3B5MD39 225 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 IGHV1-46P01743 117 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 OR5G3P0C626 314 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 LINC00869P0C866 280 aa11.92□□□□□ -0.5
SCARB2-221ENST00000640341 AMTP48728 403 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms