RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PAQR4Q8N4S7 273 aaPredicted RBP15.54■□□□□ 0.08
SCARB2-213ENST00000638680 MRPL20Q9BYC9 149 aaKnown RBP15.54■□□□□ 0.08
SCARB2-213ENST00000638680 CLDN16Q9Y5I7 305 aa15.54■□□□□ 0.08
SCARB2-213ENST00000638680 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 H3BUT2 72 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 TYMSP04818 313 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 TMEM106BQ9NUM4 274 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 ARID2Q68CP9 1835 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 NPFFO15130 113 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 NDUFA3O95167 84 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 PAPPA-AS1Q5QFB9 102 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 CA1P00915 261 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-213ENST00000638680 TGFAP01135 160 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 MRAP2Q96G30 205 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 PARP14Q460N5 1801 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 IGHV3OR16-10A0A075B7F0 116 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 TM4SF5O14894 197 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 FBLN5Q9UBX5 448 aa15.53■□□□□ 0.08
SCARB2-213ENST00000638680 MPZP25189 248 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 ASIPP42127 132 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 UNC13CQ8NB66 2214 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 PGPEP1LA6NFU8 196 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 RAMP3O60896 148 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 GAS1P54826 345 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 C1QL4Q86Z23 238 aa15.52■□□□□ 0.08
SCARB2-213ENST00000638680 A0A1B0GW15 77 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 GLRXP35754 106 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 SUMO2P61956 95 aaKnown RBP15.52■□□□□ 0.07
SCARB2-213ENST00000638680 PSG7Q13046 419 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 ORMDL3Q8N138 153 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 C10orf126Q8N4M7 172 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 DERL1Q9BUN8 251 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 VSIRQ9H7M9 311 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 JKAMPQ9P055 326 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 NRN1LQ496H8 165 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 HIST1H2BLQ99880 126 aa15.52■□□□□ 0.07
SCARB2-213ENST00000638680 MRPS16Q9Y3D3 137 aaKnown RBP15.52■□□□□ 0.07
SCARB2-213ENST00000638680 IGKV1D-8A0A087WSZ0 117 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 COLCA2A8K830 154 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 DNAL4O96015 105 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 PSMB11A5LHX3 300 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CEACAM4O75871 244 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 SNRPD3P62318 126 aaKnown RBP15.51■□□□□ 0.07
SCARB2-213ENST00000638680 FER1L6-AS1Q8NA97 138 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CACNG8Q8WXS5 425 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CD5P06127 495 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CELA3BP08861 270 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 GFI1BQ5VTD9 330 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 OR13C6PQ8NH95 151 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 RNASEH2CQ8TDP1 164 aaKnown RBP15.51■□□□□ 0.07
SCARB2-213ENST00000638680 DNAJC13O75165 2243 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 APOMO95445 188 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CXCL1P09341 107 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 LEPP41159 167 aa15.51■□□□□ 0.07
SCARB2-213ENST00000638680 CIARTQ8N365 385 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-213ENST00000638680 SBF2Q86WG5 1849 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 PIMREGQ9BSJ6 248 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 DEPPQ9NTK1 212 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 FBXL7Q9UJT9 491 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 FAM89BQ8N5H3 189 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 GDF15Q99988 308 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 RP1P56715 2156 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 FAM181BA6NEQ2 426 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 NAPSAO96009 420 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 IGKV1D-33P01593 117 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 IGKV1-33P01594 117 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 CCL1P22362 96 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 Q6AWC8 147 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 FNDC4Q9H6D8 234 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-213ENST00000638680 SCN8AQ9UQD0 1980 aa15.5■□□□□ 0.07
SCARB2-213ENST00000638680 IGHV3OR16-8A0A075B7F1 116 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 TIMM23BQ5SRD1 257 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 B9A039 149 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 SAA1P0DJI8 122 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-213ENST00000638680 TMEM144Q7Z5S9 345 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 HIST3H2BBQ8N257 126 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 WBP1Q96G27 269 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 SAA2-SAA4A0A096LPE2 208 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 IGHV2OR16-5A0A0B4J2B6 119 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 TRGV3P03979 118 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 SAA2P0DJI9 122 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-213ENST00000638680 ZNF319Q9P2F9 582 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 OCC1Q8TAD7 63 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 GP6Q9HCN6 339 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 FBLN7Q53RD9 439 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 LOXL4Q96JB6 756 aa15.49■□□□□ 0.07
SCARB2-213ENST00000638680 TRAV9-2A0A087WT02 112 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 ID3Q02535 119 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 IQCF6A8MYZ5 107 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 FAM27E3Q08E93 113 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 CYTL1Q9NRR1 136 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 SEC16AO15027 2179 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 IGHV1-2P23083 117 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 FDCSPQ8NFU4 85 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 C5orf30Q96GV9 206 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 CHODLQ9H9P2 273 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 LRRC37AA6NMS7 1700 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 A6NNC1 897 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 OTORQ9NRC9 128 aa15.48■□□□□ 0.07
SCARB2-213ENST00000638680 ELOVL5Q9NYP7 299 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms