RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 FABP9Q0Z7S8 132 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 GAMTQ14353 236 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 MLANAQ16655 118 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 IGKV1OR2-108A0A075B7D4 117 aa17.41■□□□□ 0.38
CLN6-224ENST00000638076 ERHP84090 104 aaKnown RBP17.41■□□□□ 0.38
CLN6-224ENST00000638076 KIAA0141Q14154 515 aaPredicted RBP17.41■□□□□ 0.38
CLN6-224ENST00000638076 LINC00869P0C866 280 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 IL3RAP26951 378 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 GNB1P62873 340 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 C16orf82Q7Z2V1 217 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 FAM210BQ96KR6 192 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 SLC45A2Q9UMX9 530 aa17.4■□□□□ 0.38
CLN6-224ENST00000638076 PCP4L1A6NKN8 68 aa17.39■□□□□ 0.38
CLN6-224ENST00000638076 MC5RP33032 325 aa17.39■□□□□ 0.38
CLN6-224ENST00000638076 PPOXP50336 477 aa17.39■□□□□ 0.38
CLN6-224ENST00000638076 PRB3Q04118 309 aaPredicted RBP17.39■□□□□ 0.38
CLN6-224ENST00000638076 RITA1Q96K30 269 aa17.39■□□□□ 0.38
CLN6-224ENST00000638076 ZNF430Q9H8G1 570 aaPredicted RBP17.39■□□□□ 0.38
CLN6-224ENST00000638076 METTL1Q9UBP6 276 aaKnown RBP17.39■□□□□ 0.38
CLN6-224ENST00000638076 IGHV2-26A0A0B4J1V2 119 aa17.39■□□□□ 0.37
CLN6-224ENST00000638076 IGHV3-72A0A0B4J1Y9 119 aa17.39■□□□□ 0.37
CLN6-224ENST00000638076 C10orf55Q5SWW7 151 aa17.39■□□□□ 0.37
CLN6-224ENST00000638076 NANPQ8TBE9 248 aa17.39■□□□□ 0.37
CLN6-224ENST00000638076 TMEM204Q9BSN7 226 aa17.39■□□□□ 0.37
CLN6-224ENST00000638076 ANKHD1Q8IWZ3 2542 aaKnown RBP17.38■□□□□ 0.37
CLN6-224ENST00000638076 A0A1W2PN81 502 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 AP4M1O00189 453 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 ENSAO43768 121 aaKnown RBP17.38■□□□□ 0.37
CLN6-224ENST00000638076 SLC25A17O43808 307 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 GCHFRP30047 84 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 CHRNA7P36544 502 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 CD69Q07108 199 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 ZNF98A6NK75 572 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 CGB1A6NKQ9 187 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 INS-IGF2F8WCM5 200 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 DLL1O00548 723 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 FOXH1O75593 365 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 NDUFB4O95168 129 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 FSTL3O95633 263 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 VMA21Q3ZAQ7 101 aa17.38■□□□□ 0.37
CLN6-224ENST00000638076 F6UZH7 168 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 ACTL6BO94805 426 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 VENTXO95231 258 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 OR10J1P30954 320 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 WT1-ASQ06250 92 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 FAM78BQ5VT40 261 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 OR4P4Q8NGL7 312 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 TNFRSF14Q92956 283 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 TXNDC17Q9BRA2 123 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 DERL1Q9BUN8 251 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 TPSG1Q9NRR2 321 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 LRBAP50851 2863 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 PPIAL4CA0A0B4J2A2 164 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 TRGC2P03986 189 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 PPIAL4GP0DN37 164 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 GATA2P23769 480 aaPredicted RBP17.37■□□□□ 0.37
CLN6-224ENST00000638076 HLA-DRB5Q30154 266 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 C12orf57Q99622 126 aa17.37■□□□□ 0.37
CLN6-224ENST00000638076 LY6HO94772 140 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 IGLV1-47P01700 117 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 PRRX1P54821 245 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 MIR17HGQ75NE6 70 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 NECAP1Q8NC96 275 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 OR5T1Q8NG75 326 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 ATRXP46100 2492 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 TRBV24-1A0A075B6N3 115 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 SLC16A13Q7RTY0 426 aa17.36■□□□□ 0.37
CLN6-224ENST00000638076 YTHDF2Q9Y5A9 579 aaKnown RBP17.36■□□□□ 0.37
CLN6-224ENST00000638076 H7BYZ3 331 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 LGALS7P47929 136 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 OR2T6Q8NHC8 308 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 CACNG8Q8WXS5 425 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 CLEC7AQ9BXN2 247 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 RAB1BQ9H0U4 201 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 MALRD1Q5VYJ5 2156 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 CLN5O75503 358 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 SLC35E1Q96K37 410 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 DOK5Q9P104 306 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 FUT9Q9Y231 359 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 SPTBN4Q9H254 2564 aa17.35■□□□□ 0.37
CLN6-224ENST00000638076 MT-CO2P00403 227 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 PFN1P07737 140 aaKnown RBP17.34■□□□□ 0.37
CLN6-224ENST00000638076 C1QTNF9P0C862 333 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 GPX4P36969 197 aaPredicted RBP17.34■□□□□ 0.37
CLN6-224ENST00000638076 MEOX2P50222 304 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 MRGPRG-AS1Q2M3A8 158 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 OR8B3Q8NGG8 313 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 ANAPC16Q96DE5 110 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 OR8B2Q96RD0 313 aa17.34■□□□□ 0.37
CLN6-224ENST00000638076 SCO2A0A1W2PP80 73 aa17.33■□□□□ 0.37
CLN6-224ENST00000638076 GALR1P47211 349 aa17.33■□□□□ 0.37
CLN6-224ENST00000638076 LINC01551Q86U37 167 aa17.33■□□□□ 0.37
CLN6-224ENST00000638076 ACY3Q96HD9 319 aa17.33■□□□□ 0.37
CLN6-224ENST00000638076 AURKAIP1Q9NWT8 199 aaPredicted RBP17.33■□□□□ 0.37
CLN6-224ENST00000638076 NBASA2RRP1 2371 aa17.33■□□□□ 0.37
CLN6-224ENST00000638076 ABCA4P78363 2273 aa17.33■□□□□ 0.36
CLN6-224ENST00000638076 BUB1B-PAK6H3BSN5 160 aa17.33■□□□□ 0.36
CLN6-224ENST00000638076 COX7A1P24310 79 aa17.33■□□□□ 0.36
CLN6-224ENST00000638076 OR5B12Q96R08 314 aa17.33■□□□□ 0.36
CLN6-224ENST00000638076 INSIG2Q9Y5U4 225 aa17.33■□□□□ 0.36
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