RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 GGACTQ9BVM4 153 aa17.35■□□□□ 0.37
CHRNA7-228ENST00000637519 SCAF4O95104 1147 aaKnown RBP17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 MMDQ15546 238 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 C2orf83Q53S99 150 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 MIC13Q5XKP0 118 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 ZNF787Q6DD87 383 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 CLEC2AQ6UVW9 174 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 LFNGQ8NES3 379 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 GGTLC1Q9BX51 225 aa17.34■□□□□ 0.37
CHRNA7-228ENST00000637519 SSBP2P81877 361 aaPredicted RBP17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 ERHP84090 104 aaKnown RBP17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 FAM122CQ6P4D5 195 aa17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 OR10G4Q8NGN3 311 aa17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 OR10G9Q8NGN4 311 aa17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 OR10G7Q8NGN6 311 aa17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 LSM4Q9Y4Z0 139 aaKnown RBP17.33■□□□□ 0.37
CHRNA7-228ENST00000637519 C17orf112F2Z3M2 114 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 FOXH1O75593 365 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 IGHV3-48P01763 117 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 AREGP15514 252 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 M6PRP20645 277 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 HES1Q14469 280 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 PLGLAQ15195 96 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 PPP1R27Q86WC6 154 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 NPVFQ9HCQ7 196 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 KIAA1456Q9P272 454 aa17.33■□□□□ 0.36
CHRNA7-228ENST00000637519 A0A1W2PN81 502 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 MAP1LC3B2A6NCE7 125 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 VWC2LB2RUY7 222 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 ACTL6BO94805 426 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 CHRNA7P36544 502 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 MMD2Q8IY49 270 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 P2RX4Q99571 388 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 MAP1LC3BQ9GZQ8 125 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 GNG13Q9P2W3 67 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 IGLC7A0M8Q6 106 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 RBFOX3A6NFN3 312 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 SNRNP70P08621 437 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 RPL27AP46776 148 aaKnown RBP17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 LGALS4P56470 323 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 PEA15Q15121 130 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 PXMP4Q9Y6I8 212 aa17.32■□□□□ 0.36
CHRNA7-228ENST00000637519 YIF1AO95070 293 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 FBP1P09467 338 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 COMPP49747 757 aaPredicted RBP17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 C10orf91Q5T1B1 145 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 MBD3L1Q8WWY6 194 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 EAF1Q96JC9 268 aaPredicted RBP17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 PBDC1Q9BVG4 233 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 SEC11CQ9BY50 192 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 CELSR1Q9NYQ6 3014 aa17.31■□□□□ 0.36
CHRNA7-228ENST00000637519 MAP1AP78559 2803 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 IGKV1OR2-108A0A075B7D4 117 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 IGHV3OR16-10A0A075B7F0 116 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 ZFP92A6NM28 416 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 HBE1P02100 147 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 BTN1A1Q13410 526 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 HABP2Q14520 560 aaPredicted RBP17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 TMPRSS5Q9H3S3 457 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 CARHSP1Q9Y2V2 147 aaKnown RBP17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 CHD6Q8TD26 2715 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 ZFHX3Q15911 3703 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 BTBD17A6NE02 478 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 INS-IGF2F8WCM5 200 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 GAMTQ14353 236 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 TEPPQ6URK8 271 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 OR2T6Q8NHC8 308 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 SLC39A9Q9NUM3 307 aa17.3■□□□□ 0.36
CHRNA7-228ENST00000637519 TRAV1-1A0A0B4J248 108 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 MOSP00540 346 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 KRTAP10-9P60411 292 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 ICAM4Q14773 271 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 RXFP4Q8TDU9 374 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 FNDC4Q9H6D8 234 aaPredicted RBP17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 POLQO75417 2590 aa17.29■□□□□ 0.36
CHRNA7-228ENST00000637519 NBR2O15453 112 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 MPDU1O75352 247 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 SAA4P35542 130 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 MFAP2P55001 183 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 CD69Q07108 199 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 RAB24Q969Q5 203 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 AJUBAQ96IF1 538 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 CENPEQ02224 2701 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 TEX22C9J3V5 150 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 NUPL2O15504 423 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 OPRK1P41145 380 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 UBE2E1P51965 193 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 CEBPGP53567 150 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 SLC16A13Q7RTY0 426 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 SRSF12Q8WXF0 261 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 ACY3Q96HD9 319 aa17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 TMA7Q9Y2S6 64 aaKnown RBP17.28■□□□□ 0.36
CHRNA7-228ENST00000637519 NDUFS8O00217 210 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 MBP02144 154 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 GATA2P23769 480 aaPredicted RBP17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 ACOT6Q3I5F7 207 aaPredicted RBP17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 MINOS1Q5TGZ0 78 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 RUSC1-AS1Q66K80 236 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 PIP4P2Q8N4L2 257 aa17.27■□□□□ 0.36
CHRNA7-228ENST00000637519 STPG3Q8N7X2 389 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms