RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 A6NDX4 124 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 ZNF98A6NK75 572 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 NCBP2LA6PVI3 153 aaKnown RBP11.53□□□□□ -0.56
LINC00339-208ENST00000634934 C9JQL5 133 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 S100A8P05109 93 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 CNTFRP26992 372 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 LGALS7P47929 136 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 SRSF2Q01130 221 aaKnown RBP11.53□□□□□ -0.56
LINC00339-208ENST00000634934 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 C1QL4Q86Z23 238 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 ZNF695Q8IW36 515 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 FOXRED2Q8IWF2 684 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 VKORC1L1Q8N0U8 176 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 RNF5Q99942 180 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
LINC00339-208ENST00000634934 DNAJC9-AS1A6NH13 148 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 SRRM4A7MD48 611 aaKnown RBP11.52□□□□□ -0.57
LINC00339-208ENST00000634934 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 HRASP01112 189 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 KRASP01116 189 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 ERVK-16P61578 105 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 TMEM86BQ8N661 226 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 Q8N6K4 173 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 R3HDM4Q96D70 268 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 SLC25A33Q9BSK2 321 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 VPREB3Q9UKI3 123 aa11.52□□□□□ -0.57
LINC00339-208ENST00000634934 A0A087WWC5 75 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 A0A1B0GU03 582 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 NBR2O15453 112 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 SLC25A17O43808 307 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 IGKV1-39P01597 117 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 IGKV1D-39P04432 117 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 NQO2P16083 231 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 G6PCP35575 357 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 CTAG1AP78358 180 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 PMS2P11Q13670 270 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 PLGLAQ15195 96 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 PSG5Q15238 335 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 VMA21Q3ZAQ7 101 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 TMEM252Q8N6L7 170 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
LINC00339-208ENST00000634934 HIST1H2BAQ96A08 127 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 RHOVQ96L33 236 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 RBM14Q96PK6 669 aaKnown RBP11.51□□□□□ -0.57
LINC00339-208ENST00000634934 PARD6GQ9BYG4 376 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-208ENST00000634934 SAV1Q9H4B6 383 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-208ENST00000634934 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 MMP24Q9Y5R2 645 aa11.51□□□□□ -0.57
LINC00339-208ENST00000634934 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 C1orf196B1AJZ1 125 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 DFFBO76075 338 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 HBE1P02100 147 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 HILS1P60008 231 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 CLINT1Q14677 625 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 RNASE11Q8TAA1 199 aaKnown RBP11.5□□□□□ -0.57
LINC00339-208ENST00000634934 SFT2D1Q8WV19 159 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-208ENST00000634934 JMJD8Q96S16 334 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 RAB40CQ96S21 281 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 METTL1Q9UBP6 276 aaKnown RBP11.5□□□□□ -0.57
LINC00339-208ENST00000634934 MOB4Q9Y3A3 225 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 UBE2CO00762 179 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 RRHO14718 337 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 CHST1O43916 411 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 SAA1P0DJI8 122 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-208ENST00000634934 TAS2R30P59541 319 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 UBE2KP61086 200 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 NPBQ8NG41 125 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 SMIM3Q9BZL3 60 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 FBXL15Q9H469 300 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
LINC00339-208ENST00000634934 FBN1P35555 2871 aaKnown RBP11.49□□□□□ -0.57
LINC00339-208ENST00000634934 IGSF23A1L1A6 192 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 TCF21O43680 179 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
LINC00339-208ENST00000634934 PPT1P50897 306 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 NHLH2Q02577 135 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 ZNF616Q08AN1 781 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 AWAT1Q58HT5 328 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 OR4A47Q6IF82 309 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 C16orf82Q7Z2V1 217 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 YPEL4Q96NS1 127 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 CLCC1Q96S66 551 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 RASL11BQ9BPW5 248 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 TPSG1Q9NRR2 321 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
LINC00339-208ENST00000634934 ATRQ13535 2644 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 SH2D7A6NKC9 451 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-208ENST00000634934 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms