RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 J3KRW8 73 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 J3QW42 95 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 KBTBD11O94819 623 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 MT-CO2P00403 227 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 ACAA1P09110 424 aaPredicted RBP6.15□□□□□ -1.42
PKP4-217ENST00000628904 CRYBB3P26998 211 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 CEACAM8P31997 349 aaPredicted RBP6.15□□□□□ -1.42
PKP4-217ENST00000628904 ECSCRQ19T08 205 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 ZNF672Q499Z4 452 aaPredicted RBP6.15□□□□□ -1.42
PKP4-217ENST00000628904 C16orf82Q7Z2V1 217 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 OR10D4PQ8NGN7 298 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 RAB1BQ9H0U4 201 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 CTSZQ9UBR2 303 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 VAX2Q9UIW0 290 aa6.15□□□□□ -1.42
PKP4-217ENST00000628904 FN1P02751 2386 aaKnown RBP6.15□□□□□ -1.43
PKP4-217ENST00000628904 DCHS2Q6V1P9 2916 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 CD5P06127 495 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 LINC00869P0C866 280 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 CT45A6P0DMU7 189 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 CT45A5P0DMU8 189 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 CT45A7P0DMV0 189 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 UBE2L3P68036 154 aaKnown RBP6.15□□□□□ -1.43
PKP4-217ENST00000628904 KIAA1644Q3SXP7 199 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 ODF3L1Q8IXM7 274 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 Q8TCH9 128 aa6.15□□□□□ -1.43
PKP4-217ENST00000628904 SSBP3Q9BWW4 388 aaPredicted RBP6.15□□□□□ -1.43
PKP4-217ENST00000628904 PIGBOS1A0A0B4J2F0 54 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 SCO2A0A1W2PP80 73 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 C15orf62A8K5M9 175 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 PYYP10082 97 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 GALR1P47211 349 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 RPL11P62913 178 aaKnown RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 ZNF90Q03938 601 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 VMA21Q3ZAQ7 101 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 GFI1BQ5VTD9 330 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 ZBTB34Q8NCN2 500 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 Q8NFD4 153 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 OR8B3Q8NGG8 313 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 OR8B2Q96RD0 313 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 NPVFQ9HCQ7 196 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 HSPB7Q9UBY9 170 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 UTP20O75691 2785 aaKnown RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 MUC21A0A0G2JKD1 596 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 MUC21A0A140T8X8 626 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CTXND1A0A1B0GTU2 59 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 DUXBA0A1W2PPF3 345 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 E7EUB6 86 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 F6UZH7 168 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 YPEL1O60688 119 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CEACAM4O75871 244 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 SOD3P08294 240 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CXCL1P09341 107 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 HTD2P86397 168 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 LY6EQ16553 131 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 MUC21Q5SSG8 566 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 MRPL54Q6P161 138 aaKnown RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 TREML4Q6UXN2 200 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 ZNF788Q6ZQV5 615 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 RAB1CQ92928 201 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 IL22RA2Q969J5 263 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 MALSU1Q96EH3 234 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 YPEL2Q96QA6 119 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CGB1A6NKQ9 187 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 LYL1P12980 280 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 CAMPP49913 170 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 LOXL3P58215 753 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 TRAT1Q6PIZ9 186 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 Q8WTZ3 238 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 FAM222BQ8WU58 562 aa6.14□□□□□ -1.43
PKP4-217ENST00000628904 RPUSD1Q9UJJ7 312 aaKnown RBP6.14□□□□□ -1.43
PKP4-217ENST00000628904 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 TMSB15BA0A087X1C1 80 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 ZNF729A6NN14 1252 aaPredicted RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 CLDN34H7C241 214 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 ZNF207O43670 478 aaKnown RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 IL6RP08887 468 aaPredicted RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 AREGP15514 252 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 LMO1P25800 156 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 NEIL1Q96FI4 390 aaPredicted RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 PERPQ96FX8 193 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 VKORC1Q9BQB6 163 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 PRO1933Q9H354 126 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 PPP1R2P9O14990 202 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 IL3RAP26951 378 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 RELBQ01201 579 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 FLI1Q01543 452 aaPredicted RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 TCF23Q7RTU1 214 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 OR1L8Q8NGR8 309 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 TMEM68Q96MH6 324 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 IMMP2LQ96T52 175 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 NABP2Q9BQ15 211 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 GPR61Q9BZJ8 451 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 ZNF430Q9H8G1 570 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms