RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 FAM25GB3EWG6 89 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 M0QYG6 137 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
UBR1-212ENST00000627960 GABARAPO95166 117 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 IGKV1-39P01597 117 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 IGKV1D-39P04432 117 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 SMIM18P0DKX4 95 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 ZNF182P17025 639 aaPredicted RBP9.07□□□□□ -0.96
UBR1-212ENST00000627960 ANKRD55Q3KP44 614 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 TMEM190Q8WZ59 177 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 AP3S1Q92572 193 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 BSCL2Q96G97 398 aaPredicted RBP9.07□□□□□ -0.96
UBR1-212ENST00000627960 C21orf62Q9NYP8 219 aa9.07□□□□□ -0.96
UBR1-212ENST00000627960 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
UBR1-212ENST00000627960 K7EIM0 57 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 NDUFA4O00483 81 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 ADMP35318 185 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 RNASE12Q5GAN4 147 aaKnown RBP9.06□□□□□ -0.96
UBR1-212ENST00000627960 GPR107Q5VW38 600 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 RBPMS2Q6ZRY4 209 aaKnown RBP9.06□□□□□ -0.96
UBR1-212ENST00000627960 H2BFWTQ7Z2G1 175 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 LHFPL1Q86WI0 220 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 OR1P1Q8NH06 330 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 OR52I2Q8NH67 350 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 OR4A16Q8NH70 328 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 FAM110AQ9BQ89 295 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 CHRDL1Q9BU40 450 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 C5orf66Q9H5L9 145 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 EXTL2Q9UBQ6 330 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 KLK11Q9UBX7 282 aa9.06□□□□□ -0.96
UBR1-212ENST00000627960 RND3P61587 244 aa9.05□□□□□ -0.96
UBR1-212ENST00000627960 HSPE1P61604 102 aaKnown RBP9.05□□□□□ -0.96
UBR1-212ENST00000627960 OR2C3Q8N628 320 aa9.05□□□□□ -0.96
UBR1-212ENST00000627960 ZNF486Q96H40 463 aaPredicted RBP9.05□□□□□ -0.96
UBR1-212ENST00000627960 ABHD1Q96SE0 405 aa9.05□□□□□ -0.96
UBR1-212ENST00000627960 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
UBR1-212ENST00000627960 MTFP1Q9UDX5 166 aa9.05□□□□□ -0.96
UBR1-212ENST00000627960 LCE6AA0A183 80 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 I3L2K1 104 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 K7EMT4 169 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 CD3DP04234 171 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 CTSGP08311 255 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 PGAM2P15259 253 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 PI3P19957 117 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 TBPP20226 339 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 Q56UQ5 140 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 RNASE10Q5GAN6 216 aaKnown RBP9.04□□□□□ -0.96
UBR1-212ENST00000627960 ARRDC1Q8N5I2 433 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 UBAC2Q8NBM4 344 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 ZNF114Q8NC26 417 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 C15orf40Q8WUR7 153 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 C20orf24Q9BUV8 137 aa9.04□□□□□ -0.96
UBR1-212ENST00000627960 GAR1Q9NY12 217 aaKnown RBP9.04□□□□□ -0.96
UBR1-212ENST00000627960 LOC102724200A0A096LPH7 203 aaPredicted RBP9.03□□□□□ -0.96
UBR1-212ENST00000627960 TSPAN4O14817 238 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
UBR1-212ENST00000627960 MFAP4P55083 255 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 PIGPP57054 158 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 LAMTOR1Q6IAA8 161 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 TMEM229BQ8NBD8 167 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 IL17DQ8TAD2 202 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 MISP3Q96FF7 219 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 TXN2Q99757 166 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
UBR1-212ENST00000627960 GGTLC1Q9BX51 225 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
UBR1-212ENST00000627960 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 C3orf85A0A1B0GTC6 90 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 C15orf62A8K5M9 175 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 NUPL2O15504 423 aaKnown RBP9.02□□□□□ -0.97
UBR1-212ENST00000627960 ZNF207O43670 478 aaKnown RBP9.02□□□□□ -0.97
UBR1-212ENST00000627960 MT-CO2P00403 227 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 IGKV1-5P01602 117 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 CD74P04233 296 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 P0C879 139 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 ALDH3B2P48448 385 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 ERHP84090 104 aaKnown RBP9.02□□□□□ -0.97
UBR1-212ENST00000627960 RELQ04864 619 aaPredicted RBP9.02□□□□□ -0.97
UBR1-212ENST00000627960 IZUMO4Q1ZYL8 232 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 GPR141Q7Z602 305 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 OR4D10Q8NGI6 311 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 TERB2Q8NHR7 220 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 ZFAND1Q8TCF1 268 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 TP53RKQ96S44 253 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 MRPS26Q9BYN8 205 aaKnown RBP9.02□□□□□ -0.97
UBR1-212ENST00000627960 SMPXQ9UHP9 88 aa9.02□□□□□ -0.97
UBR1-212ENST00000627960 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
UBR1-212ENST00000627960 LYSTQ99698 3801 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 A0A0B4J293 547 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 GABARAPH6UMI1 98 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 ATG12O94817 140 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 RAB3DO95716 219 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 PPP5CP53041 499 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 TAS2R19P59542 299 aa9.01□□□□□ -0.97
UBR1-212ENST00000627960 STEAP1BQ6NZ63 245 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms