RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TPTE2P1Q5T6R2 138 aa17.76■□□□□ 0.43
PNKP-220ENST00000627232 RNASEH2CQ8TDP1 164 aaKnown RBP17.76■□□□□ 0.43
PNKP-220ENST00000627232 TMPRSS5Q9H3S3 457 aa17.76■□□□□ 0.43
PNKP-220ENST00000627232 A0A1W2PPI3 338 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 TMEM250H0YL14 139 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 HTR1DP28221 377 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PLA2G5P39877 138 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 CEACAM3P40198 252 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PRR20EP86478 221 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PRR20CP86479 221 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PRR20DP86480 221 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PRR20BP86481 221 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 PRR20AP86496 221 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 WT1-ASQ06250 92 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 GCSAMLQ5JQS6 135 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 STPG3Q8N7X2 389 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 TPSG1Q9NRR2 321 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 DPM3Q9P2X0 92 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 SLC45A2Q9UMX9 530 aa17.75■□□□□ 0.43
PNKP-220ENST00000627232 CD81P60033 236 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 PRB3Q04118 309 aaPredicted RBP17.74■□□□□ 0.43
PNKP-220ENST00000627232 GAMTQ14353 236 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 SSMEM1Q8WWF3 244 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 SLC35E1Q96K37 410 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 SIGLEC9Q9Y336 463 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 ZZEF1O43149 2961 aa17.74■□□□□ 0.43
PNKP-220ENST00000627232 A0A087WWC5 75 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 COLCA2A8K830 154 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 ODF3BA8MYP8 253 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 STAG3L2P0CL84 134 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 STAG3L3P0CL85 134 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 AKR1C3P42330 323 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 PNRC1Q12796 327 aaPredicted RBP17.73■□□□□ 0.43
PNKP-220ENST00000627232 C10orf55Q5SWW7 151 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 SLC16A13Q7RTY0 426 aa17.73■□□□□ 0.43
PNKP-220ENST00000627232 B4DEV8 164 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 OVOL3O00110 214 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 NDUFS7O75251 213 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 IGHV2-5P01817 119 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 LINC00869P0C866 280 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 RPL27AP46776 148 aaKnown RBP17.72■□□□□ 0.43
PNKP-220ENST00000627232 RHOBP62745 196 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 HCP5Q6MZN7 132 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 ZNF114Q8NC26 417 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 SIRT7Q9NRC8 400 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 CXorf1O96002 111 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 DEFA4P12838 97 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 PVRIGQ6DKI7 326 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 METTL1Q9UBP6 276 aaKnown RBP17.72■□□□□ 0.43
PNKP-220ENST00000627232 KALRNO60229 2985 aa17.72■□□□□ 0.43
PNKP-220ENST00000627232 ACTL6BO94805 426 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 CNTFRP26992 372 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 COMPP49747 757 aaPredicted RBP17.71■□□□□ 0.43
PNKP-220ENST00000627232 HABP2Q14520 560 aaPredicted RBP17.71■□□□□ 0.43
PNKP-220ENST00000627232 PPP1R27Q86WC6 154 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 IQCF2Q8IXL9 164 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 NANPQ8TBE9 248 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 TXNDC17Q9BRA2 123 aa17.71■□□□□ 0.43
PNKP-220ENST00000627232 TPRP12270 2363 aaKnown RBP17.7■□□□□ 0.42
PNKP-220ENST00000627232 IGLC7A0M8Q6 106 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 PAGE4O60829 102 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 TNXAQ16473 311 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 LDLRAD2Q5SZI1 272 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 C19orf24Q9BVV8 132 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 PKD1L2Q7Z442 2459 aa17.7■□□□□ 0.42
PNKP-220ENST00000627232 IGKV1OR2-108A0A075B7D4 117 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 TIMM23O14925 209 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 VENTXO95231 258 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 OR10J1P30954 320 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 ABHD5Q8WTS1 349 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 GATAD1Q8WUU5 269 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 CFHR4Q92496 578 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 SDF2L1Q9HCN8 221 aa17.69■□□□□ 0.42
PNKP-220ENST00000627232 SPTBN1Q01082 2364 aaKnown RBP17.68■□□□□ 0.42
PNKP-220ENST00000627232 ZNF727A8MUV8 499 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 OOSP1A8MZH6 123 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 MT-ND4LP03901 98 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 FOLR2P14207 255 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 MLANAQ16655 118 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 ETFRF1Q6IPR1 90 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 SPNS3Q6ZMD2 512 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 OR4F5Q8NH21 305 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 HIST1H2BAQ96A08 127 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 OR4F4Q96R69 305 aa17.68■□□□□ 0.42
PNKP-220ENST00000627232 MT-CO2P00403 227 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 ARL14EPLP0DKL9 152 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 ZFP36P26651 326 aaKnown RBP17.67■□□□□ 0.42
PNKP-220ENST00000627232 FLI1Q01543 452 aaPredicted RBP17.67■□□□□ 0.42
PNKP-220ENST00000627232 PAX2Q02962 417 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 KLRD1Q13241 179 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 VMO1Q7Z5L0 202 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 IGFBPL1Q8WX77 278 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 SRSF8Q9BRL6 282 aaKnown RBP17.67■□□□□ 0.42
PNKP-220ENST00000627232 SIRPDQ9H106 197 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 NAT8Q9UHE5 227 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 ITPR1Q14643 2758 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 OR2C1O95371 312 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 RNF212Q495C1 297 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 MINOS1Q5TGZ0 78 aa17.67■□□□□ 0.42
PNKP-220ENST00000627232 CYP2G1PQ6ZSU1 146 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms