RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZNF114Q8NC26 417 aa10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 OR1P1Q8NH06 330 aa10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 VN1R17PQ8TDU5 208 aa10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 ENY2Q9NPA8 101 aa10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 PEMTQ9UBM1 199 aa10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 F11RQ9Y624 299 aaKnown RBP10.8□□□□□ -0.68
SNRPA1-216ENST00000626000 A0A0B4J2A0 478 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 CORTO00230 105 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 IFNA17P01571 189 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 P0C879 139 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 IL7P13232 177 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 SUB1P53999 127 aaKnown RBP eCLIP10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 WT1-ASQ06250 92 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 TMEM268Q5VZI3 342 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 TMED4Q7Z7H5 227 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 C1QL4Q86Z23 238 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 CENPSQ8N2Z9 138 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 OR52E5Q8NH55 327 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 DCUN1D4Q92564 292 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 FANCD2OSQ96PS1 177 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 OR4C12Q96R67 309 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 ALX4Q9H161 411 aaPredicted RBP10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
SNRPA1-216ENST00000626000 ANKRD34BA5PLL1 514 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 GGCTO75223 188 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 NDUFB6O95139 128 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 PRH1P02810 166 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 SNCAP37840 140 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 BAK1Q16611 211 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 OR2C3Q8N628 320 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 OR10W1Q8NGF6 305 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 DLX4Q92988 240 aaPredicted RBP10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 WDR12Q9GZL7 423 aaKnown RBP10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 MEGF8Q7Z7M0 2845 aa10.78□□□□□ -0.68
SNRPA1-216ENST00000626000 REG1AP05451 166 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SULT1A3P0DMM9 295 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SULT1A4P0DMN0 295 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 MYOD1P15172 320 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SLURP1P55000 103 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SPCS3P61009 180 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 TMEM187Q14656 261 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 PDLIM3Q53GG5 364 aaPredicted RBP10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SLC25A24Q6NUK1 477 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 ACSM6Q6P461 480 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SPSB3Q6PJ21 355 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 NOXA1Q86UR1 476 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 SELENOHQ8IZQ5 122 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 TMEM230Q96A57 120 aa10.77□□□□□ -0.69
SNRPA1-216ENST00000626000 A0A0B4J293 547 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 SAP30O75446 220 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 SCGB2A1O75556 95 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 VAMP1P23763 118 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 HOXA1P49639 335 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 CCR6P51684 374 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 LRTM2Q8N967 370 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 OR9G4Q8NGQ1 327 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 SDHCQ99643 169 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 SIGLEC8Q9NYZ4 499 aa10.76□□□□□ -0.69
SNRPA1-216ENST00000626000 A0A1B0GU03 582 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 DBX1A6NMT0 343 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 LGALS9O00182 355 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 NDUFB8O95169 186 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 SLC25A6P12236 298 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 ARL3P36405 182 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 SUPT4H1P63272 117 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 ZNF846Q147U1 533 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 FAM106AQ4KMX7 169 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 BSCL2Q96G97 398 aaPredicted RBP10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 TXN2Q99757 166 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 CACNG5Q9UF02 275 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 TMED3Q9Y3Q3 217 aa10.75□□□□□ -0.69
SNRPA1-216ENST00000626000 BMPR1BO00238 502 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 LYRM1O43325 122 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 SFT2D2O95562 160 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 LY86O95711 162 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 FCGR2BP31994 310 aaPredicted RBP10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 HTR2BP41595 481 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 ATP5IP56385 69 aaPredicted RBP10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 SMCO1Q147U7 214 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 NMSQ5H8A3 153 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 MZT2BQ6NZ67 158 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 COQ8AQ8NI60 647 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 ZNF502Q8TBZ5 544 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 CCDC140Q96MF4 163 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 HIPK2Q9H2X6 1198 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 PALMDQ9NP74 551 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
SNRPA1-216ENST00000626000 CLEC3BP05452 202 aa10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 DEFA5Q01523 94 aa10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 PLET1Q6UQ28 207 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms