RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 SDCBPO00560 298 aaPredicted RBP1.24□□□□□ -2.21
CDKL5-207ENST00000624700 DCTN3O75935 186 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 ISG15P05161 165 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 KRT7P08729 469 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 METTL15P1P0C7V9 234 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 FAM228BP0C875 321 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 TRGC1P0CF51 173 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 LYNX1P0DP58 116 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 G6PCP35575 357 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 FXYD2P54710 66 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 RAB5BP61020 215 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 COQ5Q5HYK3 327 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 FAM27BQ5VT28 67 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 ZNF676Q8N7Q3 588 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 OR1M1Q8NGA1 313 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 FUT9Q9Y231 359 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 TIMM22Q9Y584 194 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 BICRAQ9NZM4 1560 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 PDZD2O15018 2839 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 MED14O60244 1454 aa1.24□□□□□ -2.21
CDKL5-207ENST00000624700 ZDBF2Q9HCK1 2354 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 NBEAL1Q6ZS30 2694 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 ATRQ13535 2644 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 SPTBN5Q9NRC6 3674 aaKnown RBP1.23□□□□□ -2.21
CDKL5-207ENST00000624700 CEP250Q9BV73 2442 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 I3L521 148 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 IGHV3-7P01780 117 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 REG1AP05451 166 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 TFPTP0C1Z6 253 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 MOGQ16653 247 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 Q1T7F1 81 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 C10orf67Q8IYJ2 551 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 CNBD2Q96M20 576 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 LLPHQ9BRT6 129 aaKnown RBP1.23□□□□□ -2.21
CDKL5-207ENST00000624700 LSM5Q9Y4Y9 91 aaKnown RBP1.23□□□□□ -2.21
CDKL5-207ENST00000624700 PKD1L1Q8TDX9 2849 aa1.23□□□□□ -2.21
CDKL5-207ENST00000624700 BAZ2BQ9UIF8 2168 aaKnown RBP1.23□□□□□ -2.21
CDKL5-207ENST00000624700 REV3LO60673 3130 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 UNC80Q8N2C7 3258 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 ZFYVE26Q68DK2 2539 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 IGKV1D-43A0A0B4J1Z2 117 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 MAP2K4P45985 399 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 DHFR2Q86XF0 187 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 GID4Q8IVV7 300 aa1.22□□□□□ -2.21
CDKL5-207ENST00000624700 ADAT1Q9BUB4 502 aaKnown RBP1.22□□□□□ -2.21
CDKL5-207ENST00000624700 MRPS26Q9BYN8 205 aaKnown RBP1.22□□□□□ -2.21
CDKL5-207ENST00000624700 EPPK1P58107 5090 aaKnown RBP1.22□□□□□ -2.21
CDKL5-207ENST00000624700 RYR2Q92736 4967 aa1.21□□□□□ -2.21
CDKL5-207ENST00000624700 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.21
CDKL5-207ENST00000624700 ZANQ9Y493 2812 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 UBR5O95071 2799 aaPredicted RBP1.21□□□□□ -2.22
CDKL5-207ENST00000624700 FUOMA2VDF0 154 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 OR5G3P0C626 314 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 HLA-DMBP28068 263 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 RPL18Q07020 188 aaKnown RBP1.21□□□□□ -2.22
CDKL5-207ENST00000624700 HIST3H3Q16695 136 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 IBA57Q5T440 356 aaKnown RBP1.21□□□□□ -2.22
CDKL5-207ENST00000624700 FAM173BQ6P4H8 233 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 OR8B3Q8NGG8 313 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 C11orf40Q8WZ69 217 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 YIPF3Q9GZM5 350 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 PAQR5Q9NXK6 330 aaPredicted RBP1.21□□□□□ -2.22
CDKL5-207ENST00000624700 IL36BQ9NZH7 164 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 LAMB4A4D0S4 1761 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 MED12LQ86YW9 2145 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 ANAPC1Q9H1A4 1944 aa1.21□□□□□ -2.22
CDKL5-207ENST00000624700 FAM208BQ5VWN6 2430 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 CCDC88AQ3V6T2 1871 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 EVC2Q86UK5 1308 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 TPRP12270 2363 aaKnown RBP1.2□□□□□ -2.22
CDKL5-207ENST00000624700 BOD1L1Q8NFC6 3051 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 SNAPC4Q5SXM2 1469 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 GGT3PA6NGU5 568 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 KCNK1O00180 336 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 DEFA4P12838 97 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 RPS12P25398 132 aaKnown RBP1.2□□□□□ -2.22
CDKL5-207ENST00000624700 REG1BP48304 166 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 ZNF80P51504 273 aaPredicted RBP1.2□□□□□ -2.22
CDKL5-207ENST00000624700 IFITM2Q01629 132 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 STX5Q13190 355 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 GRK1Q15835 563 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 MCFD2Q8NI22 146 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 ERMAPQ96PL5 475 aaPredicted RBP1.2□□□□□ -2.22
CDKL5-207ENST00000624700 OR8D2Q9GZM6 311 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 EFCAB1Q9HAE3 211 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 TEX15Q9BXT5 2789 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 CREBBPQ92793 2442 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 NEBP20929 6669 aa1.2□□□□□ -2.22
CDKL5-207ENST00000624700 FABP5P3A8MUU1 101 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 TRAPPC2LH3BP13 241 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 CCL20P78556 96 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 ARFGEF3Q5TH69 2177 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 SYPL2Q5VXT5 272 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 LPCAT4Q643R3 524 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 Q6ZS49 121 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 C1orf158Q8N1D5 194 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 PTH2Q96A98 100 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 OR51I1Q9H343 314 aa1.19□□□□□ -2.22
CDKL5-207ENST00000624700 RELNP78509 3460 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms