RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 NAA50Q9GZZ1 169 aaKnown RBP5.33□□□□□ -1.56
CDKL5-205ENST00000623535 ARAP2Q8WZ64 1704 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 DAPP51397 102 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 POLR2GP62487 172 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDKL5-205ENST00000623535 ID3Q02535 119 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 PVRIGQ6DKI7 326 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FBXL15Q9H469 300 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 TRAV24A0A0B4J272 114 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 ARL14EPLP0DKL9 152 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 RPS27P42677 84 aaKnown RBP5.33□□□□□ -1.56
CDKL5-205ENST00000623535 RHOGP84095 191 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 MTURNQ8N3F0 131 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 CYB561D1Q8N8Q1 229 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 WDR34Q96EX3 536 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 RBKSQ9H477 322 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 A6NNC1 897 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 HLA-DRB1P01911 266 aa5.33□□□□□ -1.56
CDKL5-205ENST00000623535 FOXF2Q12947 444 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 FAM216AQ8WUB2 273 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 A0A0J9YW62 118 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 M0R1W7 72 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 PAX4O43316 350 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 LGALS1P09382 135 aaKnown RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 BSXQ3C1V8 233 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 CDCA4Q9BXL8 241 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 GALP22466 123 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 IGHV3-66A0A0C4DH42 116 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 C8orf88P0DMB2 117 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 RAE1P78406 368 aaKnown RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 CR1LQ2VPA4 569 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 WDR82Q6UXN9 313 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 GLDNQ6ZMI3 551 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 MBD3L1Q8WWY6 194 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 LOC285556D6RIA3 1793 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 RGPD2P0DJD1 1756 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SHANK3Q9BYB0 1731 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 C9orf40Q8IXQ3 194 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 RNASEH2CQ8TDP1 164 aaKnown RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 ST6GAL2Q96JF0 529 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 IGHV3OR16-13A0A075B7E8 117 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 IGHV3-74A0A0B4J1X5 117 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SEC61GP60059 68 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 ZNF721Q8TF20 911 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 FAM60AQ9NP50 221 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SONP18583 2426 aaKnown RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 NDUFA4O00483 81 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 CA1P00915 261 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 REG1AP05451 166 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 PSG4Q00888 419 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SLC25A45Q8N413 288 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 HIST1H2BAQ96A08 127 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SIGLEC7Q9Y286 467 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 ALS2Q96Q42 1657 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 DOCK3Q8IZD9 2030 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 ACTL10Q5JWF8 245 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 SRSF12Q8WXF0 261 aaKnown RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 HDHD3Q9BSH5 251 aaPredicted RBP5.32□□□□□ -1.56
CDKL5-205ENST00000623535 K7ENP7 123 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 K7ERU9 68 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 CD5LO43866 347 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 BIVMQ86UB2 503 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
CDKL5-205ENST00000623535 IGHV3-49A0A0A0MS15 119 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 MARCH11A6NNE9 402 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 UPK3AO75631 287 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 IFITM2Q01629 132 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 SRSF1Q07955 248 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 CIARTQ8N365 385 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 KLF2Q9Y5W3 355 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 C1QTNF9BB2RNN3 333 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 NEUROG1Q92886 237 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 C17orf77Q96MU5 243 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 CHKB-CPT1BH3BT56 60 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 RHODO00212 210 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 OR10S1Q8NGN2 331 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 PARLQ9H300 379 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 CCL28Q9NRJ3 127 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 VMO1Q7Z5L0 202 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 CRYGNQ8WXF5 182 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 FMC1Q96HJ9 113 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 IGHV3-35A0A0C4DH35 117 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 C11orf87Q6NUJ2 197 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 GPHB5Q86YW7 130 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 IGKV3D-20A0A0C4DH25 116 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 TMEM178BH3BS89 294 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 MST1LQ2TV78 715 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 GOLT1AQ6ZVE7 132 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 PMCHL2Q9BQD1 86 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 TMEM133Q9H2Q1 129 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 MRPS18CQ9Y3D5 142 aaKnown RBP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 QSER1Q2KHR3 1735 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 F6UB75 175 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 SPATA31B1PQ5VZV4 182 aa5.31□□□□□ -1.56
CDKL5-205ENST00000623535 ATG4DQ86TL0 474 aaPredicted RBP5.31□□□□□ -1.56
CDKL5-205ENST00000623535 CYSLTR1Q9Y271 337 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms