RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TMED6Q8WW62 240 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 GNPNAT1Q96EK6 184 aaPredicted RBP5.58□□□□□ -1.52
CBWD3-219ENST00000622817 SRSF8Q9BRL6 282 aaKnown RBP5.58□□□□□ -1.52
CBWD3-219ENST00000622817 TMEM147Q9BVK8 224 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 GGACTQ9BVM4 153 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
CBWD3-219ENST00000622817 PRRC2AP48634 2157 aaKnown RBP5.58□□□□□ -1.52
CBWD3-219ENST00000622817 CGB1A6NKQ9 187 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 E7EUB6 86 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 FCN1O00602 326 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 FBXO24O75426 580 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 CNIH1O95406 144 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 SEC11BP0C7V7 166 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 OR13C7P0DN81 318 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 SPP1P10451 314 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 SUB1P53999 127 aaKnown RBP eCLIP5.58□□□□□ -1.52
CBWD3-219ENST00000622817 DLK1P80370 383 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 BSXQ3C1V8 233 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 C2orf83Q53S99 150 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 C10orf55Q5SWW7 151 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 OR10W1Q8NGF6 305 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 LRRC20Q8TCA0 184 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 TMEM170AQ8WVE7 144 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 UQCC1Q9NVA1 299 aa5.58□□□□□ -1.52
CBWD3-219ENST00000622817 ITPR2Q14571 2701 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 CR1P17927 2039 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 A0A1B0GW64 132 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 RPS10-NUDT3A0A1W2PQS6 291 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 IGLC7A0M8Q6 106 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 RNASE2P10153 161 aaKnown RBP5.57□□□□□ -1.52
CBWD3-219ENST00000622817 WT1-ASQ06250 92 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 AANATQ16613 207 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 VWC2Q2TAL6 325 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 LRRC75BQ2VPJ9 315 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 FAM74A1Q5RGS3 127 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 ZNF562Q6V9R5 426 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 NANPQ8TBE9 248 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 RNF141Q8WVD5 230 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 SRSF12Q8WXF0 261 aaKnown RBP5.57□□□□□ -1.52
CBWD3-219ENST00000622817 RASL11BQ9BPW5 248 aa5.57□□□□□ -1.52
CBWD3-219ENST00000622817 UBE2L5PA0A1B0GUS4 154 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 TEX22C9J3V5 150 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PRSS46E5RG02 174 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FNDC10F2Z333 226 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 NMBP08949 121 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 ATP6V0CP27449 155 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SULT1A2P50226 295 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 RAB5CP51148 216 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SSBP2P81877 361 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FXYD3Q14802 87 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 TEX29Q8N6K0 151 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 Q8N9W7 124 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 OR2G3Q8NGZ4 309 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 RNASEH2CQ8TDP1 164 aaKnown RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SSX3Q99909 188 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 WDR61Q9GZS3 305 aaKnown RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SH3BGRL3Q9H299 93 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 ABCA1O95477 2261 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 CSPG4Q6UVK1 2322 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 ITPR3Q14573 2671 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PLXNB1O43157 2135 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 LINC00862A6NCI5 91 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 UMAD1C9J7I0 102 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 TRIM77I1YAP6 450 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SMAD7O15105 426 aaKnown RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FGF16O43320 207 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 MPDU1O75352 247 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FSHBP01225 129 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 HLA-DRB1P01911 266 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FAM157CP0CG43 387 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 FGF7P21781 194 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 GPX4P36969 197 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 CX3CL1P78423 397 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 BTNL8Q6UX41 500 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 ZNF114Q8NC26 417 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 OR1P1Q8NH06 330 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PIFOQ8TCI5 191 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 ABHD5Q8WTS1 349 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PCNPQ8WW12 178 aaKnown RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SSMEM1Q8WWF3 244 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 TAF15Q92804 592 aaKnown RBP eCLIP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 SAT2Q96F10 170 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 RBM14Q96PK6 669 aaKnown RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 P2RX4Q99571 388 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PSMG3Q9BT73 122 aaPredicted RBP5.56□□□□□ -1.52
CBWD3-219ENST00000622817 TIMM9Q9Y5J7 89 aa5.56□□□□□ -1.52
CBWD3-219ENST00000622817 PDZD2O15018 2839 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 SMCO3A2RU48 225 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 ZNF705EA8MWA4 302 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-219ENST00000622817 TSPAN9O75954 239 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 REG1AP05451 166 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 AREGP15514 252 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 MDKP21741 143 aaPredicted RBP5.55□□□□□ -1.52
CBWD3-219ENST00000622817 BLOC1S1P78537 153 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 SERF2P84101 59 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 RUNX1Q01196 453 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 PVRIGQ6DKI7 326 aa5.55□□□□□ -1.52
CBWD3-219ENST00000622817 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms