RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 SMPXQ9UHP9 88 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 OR51B2Q9Y5P1 312 aa17.53■□□□□ 0.4
CPSF1-214ENST00000622776 SNAPC5O75971 98 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 KRASP01116 189 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 DHRS11Q6UWP2 260 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 APRG1Q8IVJ8 170 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 CADM3Q8N126 398 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 FCAMRQ8WWV6 532 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 RNF2Q99496 336 aa17.52■□□□□ 0.4
CPSF1-214ENST00000622776 LOC100506127A0A0U1RQW1 187 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 DEDDO75618 318 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 CTSGP08311 255 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 MOB3AQ96BX8 217 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 ZNF414Q96IQ9 312 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 RHPN1-AS1Q9BWJ2 59 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 CSTL1Q9H114 145 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 IFT46Q9NQC8 304 aa17.51■□□□□ 0.39
CPSF1-214ENST00000622776 G6PCP35575 357 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 RFX2P48378 723 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 ZNF124Q15973 351 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 LGALS9CQ6DKI2 356 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 DGCR14Q96DF8 476 aaKnown RBP17.5■□□□□ 0.39
CPSF1-214ENST00000622776 TMEM56Q96MV1 263 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 ZNF2Q9BSG1 426 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-214ENST00000622776 PRNDQ9UKY0 176 aa17.5■□□□□ 0.39
CPSF1-214ENST00000622776 IGHV7-4-1A0A0J9YVY3 117 aa17.49■□□□□ 0.39
CPSF1-214ENST00000622776 CHEK1O14757 476 aa17.49■□□□□ 0.39
CPSF1-214ENST00000622776 CMC4P56277 68 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-214ENST00000622776 TMEM116Q8NCL8 245 aa17.49■□□□□ 0.39
CPSF1-214ENST00000622776 YTHDF1Q9BYJ9 559 aaKnown RBP17.49■□□□□ 0.39
CPSF1-214ENST00000622776 FKBP11Q9NYL4 201 aa17.49■□□□□ 0.39
CPSF1-214ENST00000622776 MPTX1A8MV57 137 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 XRCC3O43542 346 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 TFPI2P48307 235 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 RELQ04864 619 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-214ENST00000622776 CMTM1Q8IZ96 169 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 TSPAN14Q8NG11 270 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 OR1P1Q8NH06 330 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 GATAD1Q8WUU5 269 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 RARRES2Q99969 163 aa17.48■□□□□ 0.39
CPSF1-214ENST00000622776 IGHV3-49A0A0A0MS15 119 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 DBX1A6NMT0 343 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 NUPL2O15504 423 aaKnown RBP17.47■□□□□ 0.39
CPSF1-214ENST00000622776 YIF1AO95070 293 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 PMP2P02689 132 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 TMEM14BQ9NUH8 114 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 ANAPC10Q9UM13 185 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 HERC2O95714 4834 aa17.47■□□□□ 0.39
CPSF1-214ENST00000622776 IGKV3-7A0A075B6H7 116 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 GPR31O00270 319 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 TMEM127O75204 238 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 MFAP4P55083 255 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 OR5H2Q8NGV7 314 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 SLC25A46Q96AG3 418 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 S100A16Q96FQ6 103 aaKnown RBP17.46■□□□□ 0.39
CPSF1-214ENST00000622776 OR10C1Q96KK4 312 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 TSC22D3Q99576 134 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 VPS13DQ5THJ4 4388 aa17.46■□□□□ 0.39
CPSF1-214ENST00000622776 C15orf61A6NNL5 157 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 I3L2K1 104 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 TAS2R46P59540 309 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 NANOS2P60321 138 aaKnown RBP17.45■□□□□ 0.38
CPSF1-214ENST00000622776 FAM90A2PQ658T7 463 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 MISP3Q96FF7 219 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 TXN2Q99757 166 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 FXYD6Q9H0Q3 95 aa17.45■□□□□ 0.38
CPSF1-214ENST00000622776 TRAV14DV4A0A0A6YYC5 116 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 NAT1P18440 290 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 GBGT1Q8N5D6 347 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 OR6F1Q8NGZ6 308 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 OR11H2Q8NH07 326 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 C11orf45Q8TAV5 145 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 CMTM3Q96MX0 182 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 NXF2Q9GZY0 626 aaKnown RBP17.44■□□□□ 0.38
CPSF1-214ENST00000622776 MFFQ9GZY8 342 aa17.44■□□□□ 0.38
CPSF1-214ENST00000622776 C11orf68Q9H3H3 251 aaKnown RBP17.44■□□□□ 0.38
CPSF1-214ENST00000622776 IGHV3OR16-13A0A075B7E8 117 aa17.43■□□□□ 0.38
CPSF1-214ENST00000622776 IGHV3-74A0A0B4J1X5 117 aa17.43■□□□□ 0.38
CPSF1-214ENST00000622776 RBMS2Q15434 407 aaKnown RBP17.43■□□□□ 0.38
CPSF1-214ENST00000622776 Q9H521 79 aa17.43■□□□□ 0.38
CPSF1-214ENST00000622776 FBXL17Q9UF56 701 aa17.43■□□□□ 0.38
CPSF1-214ENST00000622776 MT-CO2P00403 227 aa17.42■□□□□ 0.38
CPSF1-214ENST00000622776 IFNA4P05014 189 aa17.42■□□□□ 0.38
CPSF1-214ENST00000622776 TAS2R20P59543 309 aa17.42■□□□□ 0.38
CPSF1-214ENST00000622776 UBE2NLQ5JXB2 153 aa17.42■□□□□ 0.38
CPSF1-214ENST00000622776 TMEM69Q5SWH9 247 aa17.42■□□□□ 0.38
CPSF1-214ENST00000622776 IGHV3-48P01763 117 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 PAFAH1B2P68402 229 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 NEDD8Q15843 81 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 PHLDA2Q53GA4 152 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 TCF24Q7RTU0 167 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 CROCCP3Q8IVE0 287 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 SEC22AQ96IW7 307 aa17.41■□□□□ 0.38
CPSF1-214ENST00000622776 FAM212BQ9NTI7 297 aaPredicted RBP17.41■□□□□ 0.38
CPSF1-214ENST00000622776 GNG7O60262 68 aa17.4■□□□□ 0.38
CPSF1-214ENST00000622776 LYSMD2Q8IV50 215 aa17.4■□□□□ 0.38
CPSF1-214ENST00000622776 ZNF114Q8NC26 417 aa17.4■□□□□ 0.38
CPSF1-214ENST00000622776 OR4A16Q8NH70 328 aa17.4■□□□□ 0.38
CPSF1-214ENST00000622776 DNAH6Q9C0G6 4158 aa17.4■□□□□ 0.38
CPSF1-214ENST00000622776 CA1P00915 261 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms