RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 MBD6Q96DN6 1003 aa10.33□□□□□ -0.76
LITAF-221ENST00000622633 DEFB127Q9H1M4 99 aa10.33□□□□□ -0.76
LITAF-221ENST00000622633 JKAMPQ9P055 326 aa10.33□□□□□ -0.76
LITAF-221ENST00000622633 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.32□□□□□ -0.76
LITAF-221ENST00000622633 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
LITAF-221ENST00000622633 ZNF525Q8N782 197 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 OR2K2Q8NGT1 345 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
LITAF-221ENST00000622633 ESPL1Q14674 2120 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 NPPCP23582 126 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 PLA2G5P39877 138 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 ATP5J2P56134 94 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 HIST1H1AQ02539 215 aaPredicted RBP10.32□□□□□ -0.76
LITAF-221ENST00000622633 AESQ08117 197 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 Q56UQ5 140 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 ZNF497Q6ZNH5 498 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 SCCPDHQ8NBX0 429 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 OR4F5Q8NH21 305 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
LITAF-221ENST00000622633 ARHGAP21Q5T5U3 1957 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 MED13Q9UHV7 2174 aa10.32□□□□□ -0.76
LITAF-221ENST00000622633 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 FCN1O00602 326 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 SP1P08047 785 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 MDH2P40926 338 aaKnown RBP10.31□□□□□ -0.76
LITAF-221ENST00000622633 ALKBH6Q3KRA9 238 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 SPANXN5Q5MJ07 72 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 KNTC1P50748 2209 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 GPR179Q6PRD1 2367 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
LITAF-221ENST00000622633 ADH4P08319 380 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 NPY1RP25929 384 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 TGFBR3Q03167 851 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 OR10J3Q5JRS4 329 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 ZNF841Q6ZN19 808 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.31□□□□□ -0.76
LITAF-221ENST00000622633 MED12LQ86YW9 2145 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 TSKUQ8WUA8 353 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 GATAD1Q8WUU5 269 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 GALMQ96C23 342 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 COMMD5Q9GZQ3 224 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 WDR61Q9GZS3 305 aaKnown RBP10.31□□□□□ -0.76
LITAF-221ENST00000622633 ARRDC1-AS1Q9H2J1 176 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 GP6Q9HCN6 339 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 YAE1D1Q9NRH1 226 aa10.31□□□□□ -0.76
LITAF-221ENST00000622633 A0A087X0K7 114 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 SSTR5P35346 364 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 TBR1Q16650 682 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
LITAF-221ENST00000622633 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 SLC25A34Q6PIV7 304 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 FOXI2Q6ZQN5 318 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 LHX4Q969G2 390 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
LITAF-221ENST00000622633 TMEM204Q9BSN7 226 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 COL27A1Q8IZC6 1860 aaPredicted RBP10.3□□□□□ -0.76
LITAF-221ENST00000622633 PIGBOS1A0A0B4J2F0 54 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 H3BUT2 72 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 GRPP07492 148 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 ARL3P36405 182 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 PSMB3P49720 205 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 LRRC75BQ2VPJ9 315 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 OR5A1Q8NGJ0 315 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 HARBI1Q96MB7 349 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 SERTAD4Q9NUC0 356 aa10.3□□□□□ -0.76
LITAF-221ENST00000622633 LRP5LA4QPB2 252 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 SNURFLB1AK76 121 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 IGFBP2P18065 325 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 NTF3P20783 257 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 HOXA4Q00056 320 aaPredicted RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 TBC1D28Q2M2D7 210 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 FGFRL1Q8N441 504 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 RAB1CQ92928 201 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 LIN7CQ9NUP9 197 aaKnown RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 KMT2EQ8IZD2 1858 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 IER3P46695 156 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 THBS3P49746 956 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 HBG1P69891 147 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 HBG2P69892 147 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 GAGE5Q13069 117 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 GAGE6Q13070 117 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 NANOS1Q8WY41 292 aaKnown RBP10.29□□□□□ -0.76
LITAF-221ENST00000622633 AP1S3Q96PC3 154 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 SFXN3Q9BWM7 321 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 UFC1Q9Y3C8 167 aa10.29□□□□□ -0.76
LITAF-221ENST00000622633 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms