RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 FAM92AA1XBS5 289 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 TSTD3H0UI37 97 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 HAND1O96004 215 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 METTL15P1P0C7V9 234 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 CSRP1P21291 193 aaKnown RBP2.15□□□□□ -2.07
CPNE3-213ENST00000622183 PSMD8P48556 350 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 RBP2P50120 134 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 DNAJB13P59910 316 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 NAA20P61599 178 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 TBPL1P62380 186 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 FKBP1AP62942 108 aaKnown RBP2.15□□□□□ -2.07
CPNE3-213ENST00000622183 RNASE10Q5GAN6 216 aaKnown RBP2.15□□□□□ -2.07
CPNE3-213ENST00000622183 OR10K2Q6IF99 312 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 HAGHLQ6PII5 290 aaPredicted RBP2.15□□□□□ -2.07
CPNE3-213ENST00000622183 SPATA12Q7Z6I5 190 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 OR13D1Q8NGV5 346 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 OR10X1Q8NGY0 326 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 CLDND2Q8NHS1 167 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 RPS4Y2Q8TD47 263 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 CCL13Q99616 98 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 MIXL1Q9H2W2 232 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 BIN3Q9NQY0 253 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 LAMC1P11047 1609 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 TRPM1Q7Z4N2 1603 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 LAMB4A4D0S4 1761 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 NAIPQ13075 1403 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 SETD5Q9C0A6 1442 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 MYH3P11055 1940 aa2.15□□□□□ -2.07
CPNE3-213ENST00000622183 ABCC10Q5T3U5 1492 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 FYCO1Q9BQS8 1478 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 ABCA9Q8IUA7 1624 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TRGV4A0A0C4DH28 118 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 MUC21A0A0G2JKD1 596 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 MUC21A0A140T8X8 626 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 KRTAP5-9P26371 169 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 XCL1P47992 114 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 EIF2B2P49770 351 aaKnown RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 RBM11P57052 281 aaKnown RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TAS2R30P59541 319 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 RPL26P61254 145 aaKnown RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 EMX1Q04741 257 aaPredicted RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 SS18Q15532 418 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 BATFQ16520 125 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TOMM20LQ6UXN7 152 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 LINC00299Q6ZSB3 139 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 HIST2H3AQ71DI3 136 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 ZNF550Q7Z398 422 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 LRRC25Q8N386 305 aaPredicted RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 GDPD1Q8N9F7 314 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 OR2T27Q8NH04 317 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 PFDN5Q99471 154 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 PECRQ9BY49 303 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TMEM222Q9H0R3 208 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 RPL26L1Q9UNX3 145 aaKnown RBP2.14□□□□□ -2.07
CPNE3-213ENST00000622183 THSD7AQ9UPZ6 1657 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 OVOS2A0A0J9YW53 1432 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 OVOS2Q6IE36 1432 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TRAPPC8Q9Y2L5 1435 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 ADAMTS12P58397 1594 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 CCDC88BA6NC98 1476 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 CCDC18Q5T9S5 1454 aa2.14□□□□□ -2.07
CPNE3-213ENST00000622183 TOP2AP11388 1531 aaKnown RBP2.13□□□□□ -2.07
CPNE3-213ENST00000622183 FOCADQ5VW36 1801 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 A0A087WUU8 490 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 TGIF2-C20orf24A0A0A6YYL0 155 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 MDFIC2A0A1B0GVS7 189 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 C9JCJ5 164 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 PPP5D1E7EU14 171 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 KCNK1O00180 336 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 GNRH2O43555 120 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 TNFSF15O95150 251 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 HIST1H1EP10412 219 aaKnown RBP2.13□□□□□ -2.07
CPNE3-213ENST00000622183 IFI30P13284 250 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 CD24P25063 80 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 RPL27AP46776 148 aaKnown RBP2.13□□□□□ -2.07
CPNE3-213ENST00000622183 GABRA2P47869 451 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 REG1BP48304 166 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 SMIM21Q3B7S5 101 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 LIN52Q52LA3 116 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 LPCAT3Q6P1A2 487 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 PACRGLQ8N7B6 248 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 SMCR5Q8TEV8 140 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 RAB2BQ8WUD1 216 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 NAT14Q8WUY8 206 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 GNPNAT1Q96EK6 184 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-213ENST00000622183 DNAJC30Q96LL9 226 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 MIEN1Q9BRT3 115 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 LRTM1Q9HBL6 345 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.13□□□□□ -2.07
CPNE3-213ENST00000622183 MED29Q9NX70 200 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 RASL12Q9NYN1 266 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 GSKIPQ9P0R6 139 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 ANAPC10Q9UM13 185 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 HSPB11Q9Y547 144 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 FAM215AQ9Y5M1 114 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 TNS3Q68CZ2 1445 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 UACAQ9BZF9 1416 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 SBF1O95248 1867 aa2.13□□□□□ -2.07
CPNE3-213ENST00000622183 CACNA1SQ13698 1873 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms