RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 MPV17P39210 176 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 CCDC144NLQ6NUI1 221 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 FAM71F2Q6NXP2 309 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 DUX5Q96PT3 197 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 MGST3O14880 152 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 MC5RP33032 325 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 LIMS1P48059 325 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 C1orf100Q5SVJ3 147 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 RAX2Q96IS3 184 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 ASIPP42127 132 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 GCSAMQ8N6F7 178 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 KIR3DL3Q8N743 410 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 FMC1Q96HJ9 113 aa8.39□□□□□ -1.07
COL4A6-210ENST00000621266 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 SLC25A45Q8N413 288 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
COL4A6-210ENST00000621266 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 FOXS1O43638 330 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 GNG5P63218 68 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 TEX45Q8NA69 505 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 PDCD11Q14690 1871 aaKnown RBP8.38□□□□□ -1.07
COL4A6-210ENST00000621266 SLC25A20O43772 301 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 HBDP02042 147 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 NBEAP1P0C6P0 100 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 TSPAN7P41732 249 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 FOXL1Q12952 345 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 GREM1O60565 184 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 ZNF146Q15072 292 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 DRAM1Q8N682 238 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 TRAV30A0A087WSZ9 112 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 LOC101059948A0A1B0GTJ6 334 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 hDV102S1A0JD36 115 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 ERVK11-1P61568 191 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 GTSCR1Q86UQ5 136 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 SAP25Q8TEE9 199 aa8.38□□□□□ -1.07
COL4A6-210ENST00000621266 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 C1orf194Q5T5A4 169 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 C9orf40Q8IXQ3 194 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 GATAD1Q8WUU5 269 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 TDGF1P13385 188 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 SLC25A28Q96A46 364 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 C16orf97H3BN30 126 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 M0R2P5 195 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 WISP3O95389 354 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 INO80CQ6PI98 192 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 SEMA5BQ9P283 1151 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 FAM106CPP0CH98 169 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 ZNF658BQ4V348 819 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 DNM1P46Q6ZS02 220 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 RNF182Q8N6D2 247 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 Q96M66 194 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 LOC105371242A0A075B767 164 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 PPIAL4CA0A0B4J2A2 164 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 BCL6BQ8N143 479 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 ZNF501Q96CX3 271 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-210ENST00000621266 MGST2Q99735 147 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 MS4A5Q9H3V2 200 aa8.37□□□□□ -1.07
COL4A6-210ENST00000621266 ADRA2AP08913 450 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-210ENST00000621266 ATP5G2Q06055 141 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 SFXN3Q9BWM7 321 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-210ENST00000621266 UCP2P55851 309 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 ASPHD2Q6ICH7 369 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 COLCA2A8K830 154 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 LAIR2Q6ISS4 152 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 UNQ9370/PRO34162Q6UXP9 181 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 EREGO14944 169 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 NPPCP23582 126 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 RAB9AP51151 201 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 RPL39P5Q59GN2 51 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 FBXW9Q5XUX1 488 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 IGHV1-45A0A0A0MS14 117 aa8.36□□□□□ -1.07
COL4A6-210ENST00000621266 CD300EQ496F6 205 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-210ENST00000621266 A0A0G2JMM0 328 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 A0A1W2PPB8 328 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 KIR3DP1A8MWS1 328 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 FAM27BQ5VT28 67 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 LINC01560Q8TB33 94 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 ITLN1Q8WWA0 313 aa8.35□□□□□ -1.07
COL4A6-210ENST00000621266 RTBDNQ9BSG5 229 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-210ENST00000621266 Q9H3A6 140 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms