RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 UBE2NLQ5JXB2 153 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 SAMD12Q8N8I0 201 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 MOB3AQ96BX8 217 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 YIPF6Q96EC8 236 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 CXorf58Q96LI9 332 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 COMMD5Q9GZQ3 224 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 Q9H521 79 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 PLEKHA2Q9HB19 425 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 IFT46Q9NQC8 304 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 NDUFA4L2Q9NRX3 87 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 COMMD9Q9P000 198 aa8.5□□□□□ -1.05
CPNE3-210ENST00000621245 PKD1P98161 4303 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 MARCH11A6NNE9 402 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 KRASP01116 189 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 SERPINE2P07093 398 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 TRAPPC2P0DI81 140 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 TRAPPC2BP0DI82 140 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 PTBP1P26599 531 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPNE3-210ENST00000621245 LPAR6P43657 344 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 ZNF124Q15973 351 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 KCTD21Q4G0X4 260 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 PHLDA2Q53GA4 152 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 PLET1Q6UQ28 207 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 DHRS11Q6UWP2 260 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 LYSMD2Q8IV50 215 aa8.49□□□□□ -1.05
CPNE3-210ENST00000621245 LOC102724200A0A096LPH7 203 aaPredicted RBP8.48□□□□□ -1.05
CPNE3-210ENST00000621245 IGKV1-39P01597 117 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 IGHV3-48P01763 117 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 IGKV1D-39P04432 117 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 F2RP25116 425 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 HRH1P35367 487 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 CBX5P45973 191 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 PMS2P11Q13670 270 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 TMEM69Q5SWH9 247 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 SLC25A24Q6NUK1 477 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 OR1L6Q8NGR2 347 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 SCARB1Q8WTV0 552 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 SRSF8Q9BRL6 282 aaKnown RBP8.48□□□□□ -1.05
CPNE3-210ENST00000621245 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 F11RQ9Y624 299 aaKnown RBP8.48□□□□□ -1.05
CPNE3-210ENST00000621245 AGRNO00468 2067 aa8.48□□□□□ -1.05
CPNE3-210ENST00000621245 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 A0A0J9YWU9 116 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 NCS1P62166 190 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 IZUMO4Q1ZYL8 232 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 RBPMS2Q6ZRY4 209 aaKnown RBP8.47□□□□□ -1.05
CPNE3-210ENST00000621245 UBAC2Q8NBM4 344 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 OR1L8Q8NGR8 309 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 OR5H2Q8NGV7 314 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 DGCR14Q96DF8 476 aaKnown RBP8.47□□□□□ -1.05
CPNE3-210ENST00000621245 C20orf24Q9BUV8 137 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 MRPL27Q9P0M9 148 aaKnown RBP8.47□□□□□ -1.05
CPNE3-210ENST00000621245 UFC1Q9Y3C8 167 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
CPNE3-210ENST00000621245 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 C15orf61A6NNL5 157 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 TSPAN4O14817 238 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 JTBO76095 146 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 FGF2P09038 288 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 RPL35AP18077 110 aaKnown RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 ELLP55199 621 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 ERVK-16P61578 105 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 SPINK9Q5DT21 86 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 RNASE12Q5GAN4 147 aaKnown RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 CD300LFQ8TDQ1 290 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 GPX8Q8TED1 209 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 LSM10Q969L4 123 aaKnown RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 MARC2Q969Z3 335 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 S100A16Q96FQ6 103 aaKnown RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 BSCL2Q96G97 398 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-210ENST00000621245 AIFM2Q9BRQ8 373 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 C5orf66Q9H5L9 145 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 TMEM14BQ9NUH8 114 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
CPNE3-210ENST00000621245 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 M0QYG6 137 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 GPR31O00270 319 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 CTSDP07339 412 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-210ENST00000621245 CTSGP08311 255 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 FCGR2BP31994 310 aaPredicted RBP8.45□□□□□ -1.06
CPNE3-210ENST00000621245 TAS2R46P59540 309 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 LYG2Q86SG7 212 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 TBC1D26Q86UD7 250 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 SNX29P2Q8IUI4 249 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 SLC25A46Q96AG3 418 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 MRGPRFQ96AM1 343 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 SEC22AQ96IW7 307 aa8.45□□□□□ -1.06
CPNE3-210ENST00000621245 SPAG8Q99932 426 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms