RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MRPS18CQ9Y3D5 142 aaKnown RBP7.61□□□□□ -1.19
GGA3-222ENST00000621217 LRP4O75096 1905 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 TRBV24-1A0A075B6N3 115 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 PSPNO60542 156 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 CNIH1O95406 144 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 PRSS1P07477 247 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 SRIP30626 198 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 BMI1P35226 326 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 ERHP84090 104 aaKnown RBP7.61□□□□□ -1.19
GGA3-222ENST00000621217 RPL39P5Q59GN2 51 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 MOB3BQ86TA1 216 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 OR8B3Q8NGG8 313 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 OR13A1Q8NGR1 328 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 VSIRQ9H7M9 311 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 TRAV38-1A0A0B4J264 116 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 ITGB1BP1O14713 200 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 CXCL1P09341 107 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 COX5BP10606 129 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 LRRC10Q5BKY1 277 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 TMEM171Q8WVE6 324 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 MEGF9Q9H1U4 602 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 METRNQ9UJH8 293 aa7.61□□□□□ -1.19
GGA3-222ENST00000621217 IGKV1-6A0A0C4DH72 117 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 UCP1P25874 307 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 NUBP1P53384 320 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 UCP3P55916 312 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 RPL31P62899 125 aaKnown RBP7.6□□□□□ -1.19
GGA3-222ENST00000621217 SLC35B1P78383 322 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 MMDQ15546 238 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 ABHD12Q8N2K0 398 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 FAM216BQ8N7L0 139 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 PMCHL2Q9BQD1 86 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 C10orf142B7Z368 130 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 CBLN1P23435 193 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 RTP5Q14D33 572 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 KIAA1644Q3SXP7 199 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 OR4P4Q8NGL7 312 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 TAF15Q92804 592 aaKnown RBP eCLIP7.6□□□□□ -1.19
GGA3-222ENST00000621217 TIMD4Q96H15 378 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 DERL1Q9BUN8 251 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 COMMD5Q9GZQ3 224 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 TBL2Q9Y4P3 447 aaKnown RBP7.6□□□□□ -1.19
GGA3-222ENST00000621217 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 IGHV1-18A0A0C4DH31 117 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 HLA-DRB1P01911 266 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 SLC25A5P05141 298 aaKnown RBP7.6□□□□□ -1.19
GGA3-222ENST00000621217 CD40P25942 277 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 RIPPLY3P57055 190 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 PSG5Q15238 335 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 TBR1Q16650 682 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 TMEM42Q69YG0 159 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 FAM57AQ8TBR7 257 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 PRDM13Q9H4Q3 707 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 LY6HO94772 140 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 GNB2P62879 340 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 MRPS11P82912 194 aaKnown RBP7.6□□□□□ -1.19
GGA3-222ENST00000621217 MST1LQ2TV78 715 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 Q6ZRM9 215 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 QTRT1Q9BXR0 403 aaKnown RBP7.6□□□□□ -1.19
GGA3-222ENST00000621217 IL36GQ9NZH8 169 aa7.6□□□□□ -1.19
GGA3-222ENST00000621217 TNCP24821 2201 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 CEACAM18A8MTB9 384 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 GNG7O60262 68 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 UBE2V1Q13404 147 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 DOLPP1Q86YN1 238 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 OR8A1Q8NGG7 326 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 SFRP2Q96HF1 295 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 PKIBQ9C010 78 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 A1L4Q6 167 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 SS18L1O75177 396 aaPredicted RBP7.59□□□□□ -1.19
GGA3-222ENST00000621217 BTF3P20290 206 aaKnown RBP7.59□□□□□ -1.19
GGA3-222ENST00000621217 NMUP48645 174 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 PRRX1P54821 245 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 TIMM23BQ5SRD1 257 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 TMEM242Q9NWH2 141 aa7.59□□□□□ -1.19
GGA3-222ENST00000621217 DSPP15924 2871 aaKnown RBP7.59□□□□□ -1.19
GGA3-222ENST00000621217 ODAMA1E959 279 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A10PA6NDY2 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A18PA6NE21 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A16PA6NEW6 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A20PA6NIJ5 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A8PA6NJQ4 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A7PA6NKC0 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A22PA8MWA6 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A12PA8MX19 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A5PA8MXJ8 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A23PA8MXZ1 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 ADH4P08319 380 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A15PP0C7V4 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A13PP0C7W8 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A14PP0C7W9 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 FAM90A24PP0C7X0 464 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 LINC00869P0C866 280 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 GZMBP10144 247 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 UBE2L3P68036 154 aaKnown RBP7.59□□□□□ -1.2
GGA3-222ENST00000621217 TTC32Q5I0X7 151 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 ZNF474Q6S9Z5 364 aaPredicted RBP7.59□□□□□ -1.2
GGA3-222ENST00000621217 FOXL2NBQ6ZUU3 175 aa7.59□□□□□ -1.2
GGA3-222ENST00000621217 CLDND2Q8NHS1 167 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms