RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 GCSAMLQ5JQS6 135 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 OR4P4Q8NGL7 312 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 GALMQ96C23 342 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
CDH1-214ENST00000621016 TNCP24821 2201 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 FAM231BA6NCW3 169 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 APOA2P02652 100 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 GYPAP02724 150 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 IGLL1P15814 213 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 MDH2P40926 338 aaKnown RBP8.91□□□□□ -0.98
CDH1-214ENST00000621016 IER3P46695 156 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 EDDM3BP56851 147 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 RNPS1Q15287 305 aaKnown RBP8.91□□□□□ -0.98
CDH1-214ENST00000621016 DEFB108BQ8NET1 73 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
CDH1-214ENST00000621016 SMDT1Q9H4I9 107 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 C11orf1Q9H5F2 150 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 KLF13Q9Y2Y9 288 aaPredicted RBP8.91□□□□□ -0.98
CDH1-214ENST00000621016 LRP5LA4QPB2 252 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 C12orf77C9JDV5 145 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 SCGB2A1O75556 95 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 IGKV1D-33P01593 117 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 IGKV1-33P01594 117 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 HBE1P02100 147 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 C1QTNF9P0C862 333 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 FAM201AQ5SY85 155 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 Q6P435 159 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 KCNIP4Q6PIL6 250 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 TGIF2LYQ8IUE0 185 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 ZNF525Q8N782 197 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 KLF14Q8TD94 323 aaPredicted RBP8.91□□□□□ -0.98
CDH1-214ENST00000621016 RCHY1Q96PM5 261 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 LINC00470Q9BZP3 86 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 GNG12Q9UBI6 72 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 APC2O95996 2303 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 OTOGLQ3ZCN5 2332 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 ABCA4P78363 2273 aa8.91□□□□□ -0.98
CDH1-214ENST00000621016 TEX48A0A1B0GUV7 120 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 H3BUT2 72 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 FCN1O00602 326 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 HBZP02008 142 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 LIPFP07098 398 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 IGHV1-2P23083 117 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 ARF6P62330 175 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 TFF3Q07654 80 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 RPP25LQ8N5L8 163 aaKnown RBP8.9□□□□□ -0.98
CDH1-214ENST00000621016 LIN7CQ9NUP9 197 aaKnown RBP8.9□□□□□ -0.98
CDH1-214ENST00000621016 HILPDAQ9Y5L2 63 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 RELNP78509 3460 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 PDE6DO43924 150 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 Q6ZR03 302 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 MTURNQ8N3F0 131 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 Q8N976 141 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 PYGO2Q9BRQ0 406 aa8.9□□□□□ -0.98
CDH1-214ENST00000621016 A0A1B0GW64 132 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A10PA6NDY2 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A18PA6NE21 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A16PA6NEW6 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A20PA6NIJ5 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A8PA6NJQ4 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A7PA6NKC0 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A22PA8MWA6 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A12PA8MX19 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A5PA8MXJ8 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A23PA8MXZ1 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 B9A039 149 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 ZNF253O75346 499 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A15PP0C7V4 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A13PP0C7W8 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A14PP0C7W9 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM90A24PP0C7X0 464 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FOXF2Q12947 444 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 STUMQ69YW2 141 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 FAM71F2Q6NXP2 309 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 H2BFWTQ7Z2G1 175 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 POLDIP2Q9Y2S7 368 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 PXMP4Q9Y6I8 212 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 AKAP13Q12802 2813 aa8.9□□□□□ -0.99
CDH1-214ENST00000621016 IGHV2-26A0A0B4J1V2 119 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 TRAV38-1A0A0B4J264 116 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 FCGR3BO75015 233 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 ATP5J2P56134 94 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 LRRC10Q5BKY1 277 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 TAF15Q92804 592 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDH1-214ENST00000621016 MRPL18Q9H0U6 180 aaKnown RBP8.89□□□□□ -0.99
CDH1-214ENST00000621016 MBNL3Q9NUK0 354 aaKnown RBP8.89□□□□□ -0.99
CDH1-214ENST00000621016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
CDH1-214ENST00000621016 SLC17A3O00476 420 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 PAGE4O60829 102 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 MEF2BQ02080 365 aaPredicted RBP8.89□□□□□ -0.99
CDH1-214ENST00000621016 ZNF497Q6ZNH5 498 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 OR4F17Q8NGA8 305 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 OR10G9Q8NGN4 311 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 OR10G7Q8NGN6 311 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 BORCS7Q96B45 105 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 SERTAD4Q9NUC0 356 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 AKAP6Q13023 2319 aa8.89□□□□□ -0.99
CDH1-214ENST00000621016 hDV102S1A0JD36 115 aa8.88□□□□□ -0.99
CDH1-214ENST00000621016 B5MCH6 92 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms