RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 USMG5Q96IX5 58 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 CCDC140Q96MF4 163 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
TARDBP-223ENST00000620632 FKBP11Q9NYL4 201 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 CACNG5Q9UF02 275 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 KCNIP3Q9Y2W7 256 aa8.3□□□□□ -1.08
TARDBP-223ENST00000620632 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
TARDBP-223ENST00000620632 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
TARDBP-223ENST00000620632 CENPXA8MT69 81 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 UPK1BO75841 260 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 ATG12O94817 140 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 NXPH3O95157 252 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 OR8U8P0C7N1 319 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 VAMP1P23763 118 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 ATP5G2Q06055 141 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 AARDQ4LEZ3 155 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 FAM219AQ8IW50 185 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 OR2C3Q8N628 320 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 RNASE11Q8TAA1 199 aaKnown RBP8.29□□□□□ -1.08
TARDBP-223ENST00000620632 C20orf85Q9H1P6 137 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 F11RQ9Y624 299 aaKnown RBP8.29□□□□□ -1.08
TARDBP-223ENST00000620632 MEGF8Q7Z7M0 2845 aa8.29□□□□□ -1.08
TARDBP-223ENST00000620632 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 C9orf170A2RU37 121 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 PPP5D1E7EU14 171 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 BMPR1BO00238 502 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 DEFA4P12838 97 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 MECP2P51608 486 aaKnown RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 HSD17B13Q7Z5P4 300 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 LGI3Q8N145 548 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 LRTM2Q8N967 370 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 OR52B4Q8NGK2 314 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 DPF1Q92782 380 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 PLEKHA3Q9HB20 300 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 PEF1Q9UBV8 284 aaKnown RBP8.28□□□□□ -1.08
TARDBP-223ENST00000620632 SHPKQ9UHJ6 478 aa8.28□□□□□ -1.08
TARDBP-223ENST00000620632 TRAV6A0A075B6T7 132 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 IGHV3-21A0A0B4J1V1 117 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 F8W735 103 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 INS-IGF2F8WCM5 200 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 K7EIM0 57 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 DHFRP00374 187 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 IFNA17P01571 189 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 HLA-AP01891 365 aaKnown RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 TCRBP04435 133 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 OR4E1P0C645 316 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 ANXA3P12429 323 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 UBE2MP61081 183 aaKnown RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 DHRS2Q13268 280 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 ASAH1Q13510 395 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 PDLIM3Q53GG5 364 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 CLEC19AQ6UXS0 136 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 ZNF114Q8NC26 417 aa8.27□□□□□ -1.09
TARDBP-223ENST00000620632 RANGRFQ9HD47 186 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-223ENST00000620632 MPTX1A8MV57 137 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 OVOL1O14753 267 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 PITX3O75364 302 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 SULT1A3P0DMM9 295 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 SULT1A4P0DMN0 295 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 RNASE2P10153 161 aaKnown RBP8.26□□□□□ -1.09
TARDBP-223ENST00000620632 HOXA1P49639 335 aaPredicted RBP8.26□□□□□ -1.09
TARDBP-223ENST00000620632 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 SRPXP78539 464 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 DEFA6Q01524 100 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 KLF5Q13887 457 aaPredicted RBP8.26□□□□□ -1.09
TARDBP-223ENST00000620632 LYG2Q86SG7 212 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 OR1P1Q8NH06 330 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 OR52E5Q8NH55 327 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 ZNF502Q8TBZ5 544 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 ZNF414Q96IQ9 312 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
TARDBP-223ENST00000620632 DUXBA0A1W2PPF3 345 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 SEC14L6B5MCN3 397 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 I3L2K1 104 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 WIPF1O43516 503 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 ADAP1O75689 374 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 DUS4LO95620 317 aaKnown RBP8.25□□□□□ -1.09
TARDBP-223ENST00000620632 IGHV3-48P01763 117 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 HOXB5P09067 269 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 EDN2P20800 178 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 ZP3P21754 424 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 SYNJ2BPP57105 145 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 SPCS3P61009 180 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 ERHP84090 104 aaKnown RBP8.25□□□□□ -1.09
TARDBP-223ENST00000620632 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 BSXQ3C1V8 233 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 ACSM6Q6P461 480 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 IL34Q6ZMJ4 242 aa8.25□□□□□ -1.09
TARDBP-223ENST00000620632 SCARB1Q8WTV0 552 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms