RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
MUC1-228ENST00000620103 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
MUC1-228ENST00000620103 NDUFAF3Q9BU61 184 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 NSG2Q9Y328 171 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 HSD17B6O14756 317 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 IGLL1P15814 213 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 FGF7P21781 194 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 Q8WTZ3 238 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 ST6GALNAC6Q969X2 333 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 LPAR5Q9H1C0 372 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 AURKAIP1Q9NWT8 199 aaPredicted RBP12.09□□□□□ -0.47
MUC1-228ENST00000620103 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
MUC1-228ENST00000620103 IGHV1-3A0A0C4DH29 117 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 PSMB11A5LHX3 300 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 IGKV1D-33P01593 117 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 IGKV1-33P01594 117 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 NHLH2Q02577 135 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 HES1Q14469 280 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 Q8N6K4 173 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 MISP3Q96FF7 219 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 GPR61Q9BZJ8 451 aa12.08□□□□□ -0.48
MUC1-228ENST00000620103 MRPS28Q9Y2Q9 187 aaKnown RBP12.08□□□□□ -0.48
MUC1-228ENST00000620103 A8MWP6 167 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 B4DEV8 164 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 SDCBPO00560 298 aaPredicted RBP12.07□□□□□ -0.48
MUC1-228ENST00000620103 IFNA21P01568 189 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 IGHG2P01859 326 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 PF4P02776 101 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 CXCL1P09341 107 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 JOSD1Q15040 202 aaPredicted RBP12.07□□□□□ -0.48
MUC1-228ENST00000620103 GLIPR1L1Q6UWM5 242 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 EAF1Q96JC9 268 aaPredicted RBP12.07□□□□□ -0.48
MUC1-228ENST00000620103 C14orf166Q9Y224 244 aaKnown RBP12.07□□□□□ -0.48
MUC1-228ENST00000620103 FBXO7Q9Y3I1 522 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
MUC1-228ENST00000620103 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 H3BQ15 152 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 OR13C7P0DN81 318 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 ZNF137PP52743 207 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 TMEM30BQ3MIR4 351 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
MUC1-228ENST00000620103 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 NEK7Q8TDX7 302 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 PRR13Q9NZ81 148 aa12.07□□□□□ -0.48
MUC1-228ENST00000620103 A0A0A6YYD4 124 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 SMCO3A2RU48 225 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 C12orf77C9JDV5 145 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 CA11O75493 328 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
MUC1-228ENST00000620103 REG1BP48304 166 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 UBE2KP61086 200 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 ZNF329Q86UD4 541 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 LINC00482Q8N8I6 264 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 ZNF439Q8NDP4 499 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 KCNG3Q8TAE7 436 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 RTN4IP1Q8WWV3 396 aaPredicted RBP12.06□□□□□ -0.48
MUC1-228ENST00000620103 TVP23CQ96ET8 276 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
MUC1-228ENST00000620103 HIPK2Q9H2X6 1198 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 KIAA1456Q9P272 454 aa12.06□□□□□ -0.48
MUC1-228ENST00000620103 RBFOX3A6NFN3 312 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 PRH1P02810 166 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 CTSDP07339 412 aaPredicted RBP12.05□□□□□ -0.48
MUC1-228ENST00000620103 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
MUC1-228ENST00000620103 CD1BP29016 333 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 RND2P52198 227 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 RPL23AP62750 156 aaKnown RBP12.05□□□□□ -0.48
MUC1-228ENST00000620103 SLC25A48Q6ZT89 311 aaKnown RBP12.05□□□□□ -0.48
MUC1-228ENST00000620103 MOB3BQ86TA1 216 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 OR10G4Q8NGN3 311 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 Q96M66 194 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 PACRGQ96M98 296 aaPredicted RBP12.05□□□□□ -0.48
MUC1-228ENST00000620103 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 WFDC1Q9HC57 220 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 TMEM242Q9NWH2 141 aa12.05□□□□□ -0.48
MUC1-228ENST00000620103 IGHV3-43A0A0B4J1X8 118 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 IGHV3-72A0A0B4J1Y9 119 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 SERPINE3A8MV23 424 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 HSPB1P04792 205 aaKnown RBP12.04□□□□□ -0.48
MUC1-228ENST00000620103 IGHV3-43DP0DP04 118 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 IL3RAP26951 378 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 KHDC1LQ5JSQ8 128 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 PLAC9Q5JTB6 97 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 OR2T10Q8NGZ9 312 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 BANF2Q9H503 90 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 RAB9BQ9NP90 201 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 CRYM-AS1A6NIL9 109 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 SPINT2O43291 252 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 PI3P19957 117 aa12.04□□□□□ -0.48
MUC1-228ENST00000620103 FUT3P21217 361 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms