RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 HSPB1P04792 205 aaKnown RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 HINT1P49773 126 aaPredicted RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 EGR1P18146 543 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 MRPL20Q9BYC9 149 aaKnown RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 SAA2P0DJI9 122 aaPredicted RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 CDX1P47902 265 aaPredicted RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 DNM1P46Q6ZS02 220 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 DMRT1Q9Y5R6 373 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 EIF3GO75821 320 aaKnown RBP eCLIP11.56□□□□□ -0.56
CIITA-213ENST00000618327 COMPP49747 757 aaPredicted RBP11.56□□□□□ -0.56
CIITA-213ENST00000618327 DLX1P56177 255 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 Q6P435 159 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 C12orf54Q6X4T0 127 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 TRAV14DV4A0A0A6YYC5 116 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 TMEM178BH3BS89 294 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 ZNF137PP52743 207 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 SELENOTP62341 195 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 C18orf12Q96KH6 178 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 PLP1P60201 277 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 LAMTOR1Q6IAA8 161 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 UQCR10Q9UDW1 63 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 SH2D7A6NKC9 451 aaPredicted RBP11.56□□□□□ -0.56
CIITA-213ENST00000618327 H3BVH4 76 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 ORM1P02763 201 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 RND2P52198 227 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 SLC35B1P78383 322 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
CIITA-213ENST00000618327 WDR87Q6ZQQ6 2873 aa11.56□□□□□ -0.56
CIITA-213ENST00000618327 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 CA2P00918 260 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 LINC00869P0C866 280 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 HYPMO75409 117 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 REG1AP05451 166 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 PMCHL1Q16048 86 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 C1orf147Q96MC9 270 aaPredicted RBP11.55□□□□□ -0.56
CIITA-213ENST00000618327 TMEM133Q9H2Q1 129 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 ZFP30Q9Y2G7 519 aa11.55□□□□□ -0.56
CIITA-213ENST00000618327 NDUFB4O95168 129 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 NMUP48645 174 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 CEP192Q8TEP8 1941 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 TRBV6-6A0A0A6YYG2 114 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 RNF222A6NCQ9 220 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
CIITA-213ENST00000618327 OR5R1Q8NH85 324 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 A8MWL6 223 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 FXYD3Q14802 87 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 SPATA45Q537H7 98 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 TXNDC17Q9BRA2 123 aa11.54□□□□□ -0.56
CIITA-213ENST00000618327 ZNF430Q9H8G1 570 aaPredicted RBP11.54□□□□□ -0.56
CIITA-213ENST00000618327 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 C3orf36Q3SXR2 165 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 RPUSD1Q9UJJ7 312 aaKnown RBP11.53□□□□□ -0.56
CIITA-213ENST00000618327 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 IGKV1D-17A0A075B6S4 117 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 E7EQL1 145 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 RAMP3O60896 148 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 DUTP33316 252 aaKnown RBP11.53□□□□□ -0.56
CIITA-213ENST00000618327 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
CIITA-213ENST00000618327 ZNF788Q6ZQV5 615 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 C5orf24Q7Z6I8 188 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 TMEM204Q9BSN7 226 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 RNF126Q9BV68 326 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 SOD3P08294 240 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
CIITA-213ENST00000618327 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 IGLV1-44P01699 117 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 FABP2P12104 132 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 LY6EQ16553 131 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 DOCK10Q96BY6 2186 aa11.53□□□□□ -0.56
CIITA-213ENST00000618327 A0A1B0GV90 55 aa11.52□□□□□ -0.56
CIITA-213ENST00000618327 DANCRP0C864 163 aa11.52□□□□□ -0.56
CIITA-213ENST00000618327 WDR25Q64LD2 544 aaPredicted RBP11.52□□□□□ -0.56
CIITA-213ENST00000618327 LRTM2Q8N967 370 aa11.52□□□□□ -0.56
CIITA-213ENST00000618327 COQ2Q96H96 371 aa11.52□□□□□ -0.56
CIITA-213ENST00000618327 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.56
CIITA-213ENST00000618327 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.56
CIITA-213ENST00000618327 RBFOX2O43251 390 aaKnown RBP eCLIP11.52□□□□□ -0.57
CIITA-213ENST00000618327 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.57
CIITA-213ENST00000618327 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 P2RX4Q99571 388 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 PAXXQ9BUH6 204 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 WNK2Q9Y3S1 2297 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 M0R3E3 92 aa11.52□□□□□ -0.57
CIITA-213ENST00000618327 IGKV1D-33P01593 117 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms