RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TMEM167AQ8TBQ9 72 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 SCGB3A1Q96QR1 104 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 MOSPD3O75425 235 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 IGHV3-48P01763 117 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 HOXA5P20719 270 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 ZNF79Q15937 498 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 C5orf66Q9H5L9 145 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 IGHV3-66A0A0C4DH42 116 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 C1orf100Q5SVJ3 147 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 KIR3DL3Q8N743 410 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 FAM57AQ8TBR7 257 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 FOXC2Q99958 501 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 VCX2Q9H322 139 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 PLAC1Q9HBJ0 212 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 PSMG3Q9BT73 122 aaPredicted RBP9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 IGHV3-23P01764 117 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 C21orf62Q9NYP8 219 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 TANC2Q9HCD6 1990 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 A0A1W2PP11 408 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 TGFAP01135 160 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 RLFQ13129 1914 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 NBEAP1P0C6P0 100 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 OTX1P32242 354 aaPredicted RBP9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 DRAM1Q8N682 238 aa9.48□□□□□ -0.89
CCDC144B-208ENST00000618081 GCHFRP30047 84 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 OR11H4Q8NGC9 324 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 FOXJ2Q9P0K8 574 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 PLXNB3Q9ULL4 1909 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 EFEMP2O95967 443 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 DANCRP0C864 163 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 F12P00748 615 aaPredicted RBP9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 LEPP41159 167 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 CACNA1HO95180 2353 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 SOD3P08294 240 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 ATP1A1-AS1Q5TC04 95 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 CXCL2P19875 107 aa9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
CCDC144B-208ENST00000618081 TRAV24A0A0B4J272 114 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 NRN1LQ496H8 165 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 CLEC19AQ6UXS0 136 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 OR10J3Q5JRS4 329 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 IGHV3-49A0A0A0MS15 119 aa9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 EIF3GO75821 320 aaKnown RBP eCLIP9.46□□□□□ -0.89
CCDC144B-208ENST00000618081 VENTXO95231 258 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 IL6RP08887 468 aaPredicted RBP9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 GZMMP51124 257 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 COLCA1Q6ZS62 124 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 TRAV8-6A0A0B4J262 113 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 TCRBV4S1A1TA0A5B7 111 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 C1QL1O75973 258 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 HLA-DQB1P01920 261 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 ASPHD2Q6ICH7 369 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 DTX1Q86Y01 620 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 TRBV5-7A0A0A0MS05 114 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 TBR1Q16650 682 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 GPHA2Q96T91 129 aa9.46□□□□□ -0.9
CCDC144B-208ENST00000618081 H3BTX0 84 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 LILRA1O75019 489 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 CACNG8Q8WXS5 425 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 LINC00312Q9Y6C7 94 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 CIARTQ8N365 385 aaPredicted RBP9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 PEF1Q9UBV8 284 aaKnown RBP9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 KBTBD11-OT1A0A1B0GTJ5 212 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 SSC4DQ8WTU2 575 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 FBXL15Q9H469 300 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 TNCP24821 2201 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 UBE2DNLQ8IWF7 75 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 CECR9P0C854 216 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 SDHCQ99643 169 aaPredicted RBP9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 TMEM187Q14656 261 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 NXT2Q9NPJ8 142 aaKnown RBP9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 METRNQ9UJH8 293 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 IGHV3OR16-13A0A075B7E8 117 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 IGHV3-74A0A0B4J1X5 117 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 MDKP21741 143 aaPredicted RBP9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 ORMDL3Q8N138 153 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 CBLN4Q9NTU7 201 aa9.45□□□□□ -0.9
CCDC144B-208ENST00000618081 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 OR5AN1Q8NGI8 311 aa9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 CD7P09564 240 aa9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 C2orf16Q68DN1 1984 aa9.44□□□□□ -0.9
CCDC144B-208ENST00000618081 DPRXA6NFQ7 191 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms