RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 CGB1A6NKQ9 187 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 C11orf94C9JXX5 98 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 BUB1B-PAK6H3BSN5 160 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 PDE6DO43924 150 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 RND2P52198 227 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 SPNS3Q6ZMD2 512 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 PARLQ9H300 379 aa12.7□□□□□ -0.38
NR1H3-235ENST00000616973 AMMECR1Q9Y4X0 333 aaPredicted RBP12.7□□□□□ -0.38
NR1H3-235ENST00000616973 LIPFP07098 398 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 ARL14EPLP0DKL9 152 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 GAMTQ14353 236 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 MRGPRG-AS1Q2M3A8 158 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 ZFP82Q8N141 532 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 RNASEH2CQ8TDP1 164 aaKnown RBP12.69□□□□□ -0.38
NR1H3-235ENST00000616973 ABHD5Q8WTS1 349 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 MALRD1Q5VYJ5 2156 aa12.69□□□□□ -0.38
NR1H3-235ENST00000616973 E7EUB6 86 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 F6UZH7 168 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 CLDN34H7C241 214 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
NR1H3-235ENST00000616973 PNKDQ8N490 385 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 C2CD4CQ8TF44 421 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
NR1H3-235ENST00000616973 ANKHD1Q8IWZ3 2542 aaKnown RBP12.68□□□□□ -0.38
NR1H3-235ENST00000616973 IGHV1-3A0A0C4DH29 117 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 SLC25A17O43808 307 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 VENTXO95231 258 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 CRYGBP07316 175 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 SOD3P08294 240 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 Q8WTZ3 238 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 C19orf24Q9BVV8 132 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
NR1H3-235ENST00000616973 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 RPL23P62829 140 aaKnown RBP12.67□□□□□ -0.38
NR1H3-235ENST00000616973 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 ZNF674Q2M3X9 581 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 SLC16A13Q7RTY0 426 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 OR4P4Q8NGL7 312 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 RITA1Q96K30 269 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 SEPSECSQ9HD40 501 aaKnown RBP12.67□□□□□ -0.38
NR1H3-235ENST00000616973 INSIG2Q9Y5U4 225 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 CHD8Q9HCK8 2581 aa12.67□□□□□ -0.38
NR1H3-235ENST00000616973 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
NR1H3-235ENST00000616973 NPPCP23582 126 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 GCHFRP30047 84 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 C4orf17Q53FE4 359 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 MOB3BQ86TA1 216 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 MRPL41Q8IXM3 137 aaKnown RBP12.66□□□□□ -0.38
NR1H3-235ENST00000616973 RNF5Q99942 180 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 CHODLQ9H9P2 273 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 C22orf46C9J442 243 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 CLN5O75503 358 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 MT-CO2P00403 227 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 CXCL1P09341 107 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 OR10J1P30954 320 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ATP5G3P48201 142 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ADIRFQ15847 76 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 PRSS8Q16651 343 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 C10orf55Q5SWW7 151 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 TPSG1Q9NRR2 321 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
NR1H3-235ENST00000616973 ADGRG4Q8IZF6 3080 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 SPTA1P02549 2419 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 DLX1P56177 255 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 UBE2G2P60604 165 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 GNB1P62873 340 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 CST9LP1Q5W188 147 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 ZNF114Q8NC26 417 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 RPEQ96AT9 228 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 DOK5Q9P104 306 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 FUT9Q9Y231 359 aa12.65□□□□□ -0.38
NR1H3-235ENST00000616973 A0A1W2PPI3 338 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 C5orf52A6NGY3 159 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 M0R1W7 72 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 LY6HO94772 140 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 PSG5Q15238 335 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 MLANAQ16655 118 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 SPATA31B1PQ5VZV4 182 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 TGIF2-C20orf24A0A0A6YYL0 155 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 OR5G3P0C626 314 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 COX7A1P24310 79 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 RPS10P46783 165 aaKnown RBP12.64□□□□□ -0.39
NR1H3-235ENST00000616973 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 SIGLEC9Q9Y336 463 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
NR1H3-235ENST00000616973 ABCA4P78363 2273 aa12.63□□□□□ -0.39
NR1H3-235ENST00000616973 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
NR1H3-235ENST00000616973 IGLC7A0M8Q6 106 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms