RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 COL4A4P53420 1690 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF318Q5VUA4 2279 aa7.83□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF407Q9C0G0 2248 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TEX50A0A1B0GTY4 177 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 RRHO14718 337 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 SMIM6P0DI80 62 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 CRISP2P16562 243 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TPTE2P1Q5T6R2 138 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF525Q8N782 197 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 OR2D3Q8NGH3 330 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 RNF5Q99942 180 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 SPRY4Q9C004 299 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TRBV6-6A0A0A6YYG2 114 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 OR5AL1P0C617 328 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 GATA3P23771 443 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 GPX4P36969 197 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 MEF2BQ02080 365 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TMEM189A5PLL7 270 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 H3BQ15 152 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 NAPSAO96009 420 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 RRN3P1Q2M238 152 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 ROS1P08922 2347 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TMSB15BA0A087X1C1 80 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 F8VVB4 439 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 F8VWA3 439 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3-23P01764 117 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 IL6RP08887 468 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 EFNB3Q15768 340 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 Q6P435 159 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 SRD5A3Q9H8P0 318 aa7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 TBL2Q9Y4P3 447 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-208ENST00000615606 IGKV1D-17A0A075B6S4 117 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 TRAV34A0A0B4J273 112 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 A8MWL6 223 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF253O75346 499 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 CD24P25063 80 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 PLA2G5P39877 138 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF880Q6PDB4 577 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 CLEC19AQ6UXS0 136 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 HSPB7Q9UBY9 170 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 NPFFO15130 113 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 IGLV1-44P01699 117 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 MGPP08493 103 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 OR9G9P0C7N8 305 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 MYOD1P15172 320 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 GATA4P43694 442 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 SMUG1Q53HV7 270 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 SAMD13Q5VXD3 122 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF660Q6AZW8 331 aaPredicted RBP7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 LINC00305Q7Z4B0 112 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 Q8TCH9 128 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 BET1LQ9NYM9 111 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 A0A087X0M5 115 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 A0A1B0GX30 115 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 K7EM74 188 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ISLRO14498 428 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 C1QL1O75973 258 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 Q5PR19 223 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 C18orf12Q96KH6 178 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 SPTAN1Q13813 2472 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 IGKV1D-8A0A087WSZ0 117 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF98A6NK75 572 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 HSPB1P04792 205 aaKnown RBP7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 Q1RN00 199 aa7.81□□□□□ -1.16
CLTCL1-208ENST00000615606 M0R143 59 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 LY6HO94772 140 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 NDUFB4O95168 129 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3-11P01762 117 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 NUTF2P61970 127 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 ASCL4Q6XD76 172 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 RNF138Q8WVD3 245 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 NPCDR1Q9BY65 106 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 HEATR1Q9H583 2144 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 S4R3C0 116 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 SPTBN1Q01082 2364 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 CACNA1DQ01668 2161 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV1-3A0A0C4DH29 117 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 CGB1A6NKQ9 187 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 WISP1O95388 367 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 RPS20P60866 119 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 KLRD1Q13241 179 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 SLC25A48Q6ZT89 311 aaKnown RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 CLDND2Q8NHS1 167 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 FUT9Q9Y231 359 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 A0A1W2PNU3 283 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 DKK1O94907 266 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 PACRGQ96M98 296 aaPredicted RBP7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 A0A1W2PRX2 142 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 CSN3P07498 182 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 NMBP08949 121 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 LYPD2Q6UXB3 125 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 C8orf46Q8TAG6 207 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
CLTCL1-208ENST00000615606 IGHV3OR16-12A0A075B7B8 117 aa7.79□□□□□ -1.16
CLTCL1-208ENST00000615606 RAMP3O60896 148 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms