RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 VPREB3Q9UKI3 123 aa9.05□□□□□ -0.96
SLIRP-212ENST00000613856 A0A0D9SG52 128 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 IGLC7A0M8Q6 106 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 MSGN1A6NI15 193 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 E7EUB6 86 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 FCN1O00602 326 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 CXCL2P19875 107 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 RPL12P30050 165 aaKnown RBP9.04□□□□□ -0.96
SLIRP-212ENST00000613856 CAV2P51636 162 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 ATP5IP56385 69 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-212ENST00000613856 UBA52P62987 128 aaKnown RBP9.04□□□□□ -0.96
SLIRP-212ENST00000613856 RPP30P78346 268 aaKnown RBP9.04□□□□□ -0.96
SLIRP-212ENST00000613856 BAXQ07812 192 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 BSXQ3C1V8 233 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 SPINK9Q5DT21 86 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 TMEM14EPQ6UXP3 125 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 STPG2Q8N412 459 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 KCNRGQ8N5I3 272 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 ARPC1AQ92747 370 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 SLC25A31Q9H0C2 315 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 HEYLQ9NQ87 328 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-212ENST00000613856 U3KQ87 197 aa9.04□□□□□ -0.96
SLIRP-212ENST00000613856 IGHV7-81A0A0B4J1V7 117 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 IGSF23A1L1A6 192 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 FAM24AA6NFZ4 105 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 C15orf62A8K5M9 175 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 H3BP45 60 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 OPN1MWP04001 364 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 AMY1AP04745 511 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 OPN1MW2P0DN77 364 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 OPN1MW3P0DN78 364 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 C4BPBP20851 252 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 GNB1P62873 340 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 CX3CL1P78423 397 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 NDPQ00604 133 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.96
SLIRP-212ENST00000613856 FXYD3Q14802 87 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 LY6EQ16553 131 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 LGALSLQ3ZCW2 172 aaPredicted RBP9.03□□□□□ -0.96
SLIRP-212ENST00000613856 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 STX12Q86Y82 276 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 SIGLECL1Q8N7X8 197 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 ZNF114Q8NC26 417 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 SLC24A4Q8NFF2 622 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 OR4C12Q96R67 309 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 HINT2Q9BX68 163 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 STRAPQ9Y3F4 350 aaKnown RBP9.03□□□□□ -0.96
SLIRP-212ENST00000613856 HSPB11Q9Y547 144 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 NOTCH1P46531 2555 aa9.03□□□□□ -0.96
SLIRP-212ENST00000613856 HOXA3O43365 443 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-212ENST00000613856 CNIH1O95406 144 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 NPY1RP25929 384 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 S100A11P31949 105 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 HTR2BP41595 481 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 SULT1A1P50225 295 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 CRIP2P52943 208 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-212ENST00000613856 ERHP84090 104 aaKnown RBP9.02□□□□□ -0.97
SLIRP-212ENST00000613856 WT1-ASQ06250 92 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 SPANXN5Q5MJ07 72 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 TMUB2Q71RG4 321 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 HSPB9Q9BQS6 159 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 WNK1Q9H4A3 2382 aa9.02□□□□□ -0.97
SLIRP-212ENST00000613856 BCL2L11O43521 198 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 IFNA10P01566 189 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 RNASE2P10153 161 aaKnown RBP9.01□□□□□ -0.97
SLIRP-212ENST00000613856 TMEM267Q0VDI3 215 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-212ENST00000613856 C2orf83Q53S99 150 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 PVRIGQ6DKI7 326 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 ZC4H2Q9NQZ6 224 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 ZNF580Q9UK33 172 aa9.01□□□□□ -0.97
SLIRP-212ENST00000613856 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 NPIPB5A8MRT5 1133 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 CLDN34H7C241 214 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 TAAR5O14804 337 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 IGHG2P01859 326 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 CRYGCP07315 174 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 OR8U8P0C7N1 319 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 METTL15P1P0C7V9 234 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 OR13C7P0DN81 318 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
SLIRP-212ENST00000613856 AREGP15514 252 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 SNCAP37840 140 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 AP2S1P53680 142 aaPredicted RBP9□□□□□ -0.97
SLIRP-212ENST00000613856 RAB11AP62491 216 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 HBG1P69891 147 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 HBG2P69892 147 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 RBMS3Q6XE24 437 aaKnown RBP9□□□□□ -0.97
SLIRP-212ENST00000613856 HAPLN4Q86UW8 402 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 ABHD5Q8WTS1 349 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 TMEM68Q96MH6 324 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 FBXL17Q9UF56 701 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 FBXO7Q9Y3I1 522 aa9□□□□□ -0.97
SLIRP-212ENST00000613856 DNAJC9-AS1A6NH13 148 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms