RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PTPRFP10586 1907 aa14.66□□□□□ -0.06
HMGXB3-206ENST00000613459 SPAG17Q6Q759 2223 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 ZNFX1Q9P2E3 1918 aaKnown RBP14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 IGLV3-32A0A0A0MS00 114 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 CD69Q07108 199 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 CSRP2Q16527 193 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 C1QL2Q7Z5L3 287 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 ATP5G3P48201 142 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 PGPEP1LA6NFU8 196 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 RPL23P62829 140 aaKnown RBP14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 FER1L6-AS1Q8NA97 138 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 OR5A1Q8NGJ0 315 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 OR13A1Q8NGR1 328 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 ZNHIT1O43257 154 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 CTSBP07858 339 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 SRSF7Q16629 238 aaKnown RBP eCLIP14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 GDF15Q99988 308 aa14.65□□□□□ -0.06
HMGXB3-206ENST00000613459 RBMY1BA6NDE4 496 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 RBMY1EA6NEQ0 496 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 RBMY1DP0C7P1 496 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 RBMY1A1P0DJD3 496 aaKnown RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 RBMY1CP0DJD4 496 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 IGLV3-12A0A075B6K2 115 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 UPK2O00526 184 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 TMEM50AO95807 157 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 CCL20P78556 96 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 PF4P02776 101 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 OR10J3Q5JRS4 329 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 NRN1Q9NPD7 142 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 ZIC4Q8N9L1 334 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 ST6GALNAC6Q969X2 333 aa14.64□□□□□ -0.07
HMGXB3-206ENST00000613459 REG4Q9BYZ8 158 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 FBXL15Q9H469 300 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 LINC01559Q495D7 138 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 IMMP1LQ96LU5 166 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 RAMP1O60894 148 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 TIAF1O95411 115 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 LEPP41159 167 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 OSTCQ9NRP0 149 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 PEMTQ9UBM1 199 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 SEC16AO15027 2179 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 MYOD1P15172 320 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 ADMP35318 185 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 FDCSPQ8NFU4 85 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 SERF1AO75920 110 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 CACNG7P62955 275 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 Q9H3A6 140 aa14.63□□□□□ -0.07
HMGXB3-206ENST00000613459 F8VVB4 439 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 F8VWA3 439 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 TYMSP04818 313 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 RFPL3SP0C7P2 107 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 FAM166AQ6J272 317 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 WNK3Q9BYP7 1800 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 IGKV1D-33P01593 117 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 IGKV1-33P01594 117 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 PPBPP02775 128 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 A0A1W2PRE2 83 aa14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 SSBP4Q9BWG4 385 aaPredicted RBP14.62□□□□□ -0.07
HMGXB3-206ENST00000613459 C15orf61A6NNL5 157 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 H3BUT2 72 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 SRSF3P84103 164 aaKnown RBP14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 SIGLEC12Q96PQ1 595 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 MRPL20Q9BYC9 149 aaKnown RBP14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 LOC102723996A0A087X1L8 192 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 SNAI2O43623 268 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 MIR17HGQ75NE6 70 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 TRAV9-2A0A087WT02 112 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 C17orf100A8MU93 164 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 FBLN7Q53RD9 439 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 MRPL14Q6P1L8 145 aaKnown RBP14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 PSG7Q13046 419 aa14.61□□□□□ -0.07
HMGXB3-206ENST00000613459 M0R381 172 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 FAM89BQ8N5H3 189 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 TNFRSF14Q92956 283 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 SLC25A2Q9BXI2 301 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 ZNF257Q9Y2Q1 563 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 NRXN2Q9P2S2 1712 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 IGKV3OR2-268A0A0C4DH90 116 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 FABP5P3A8MUU1 101 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 DUSP14O95147 198 aaKnown RBP14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 NDUFA3O95167 84 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 IGKV1D-43A0A0B4J1Z2 117 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 NBR2O15453 112 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 FAM19A2Q8N3H0 131 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 HIGD1CA8MV81 97 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 C9JCJ5 164 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 LDLRAD4O15165 306 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 FGF16O43320 207 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 IGHV1-2P23083 117 aa14.6□□□□□ -0.07
HMGXB3-206ENST00000613459 DUX3Q96PT4 197 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 TMEM262E9PQX1 116 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 FAM216BQ8N7L0 139 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 CNTFRP26992 372 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 PLAURQ03405 335 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 ZNF497Q6ZNH5 498 aa14.59□□□□□ -0.07
HMGXB3-206ENST00000613459 CHCHD1Q96BP2 118 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms