RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FCN1O00602 326 aa13.59□□□□□ -0.23
CNOT3-208ENST00000613073 G6PCP35575 357 aa13.59□□□□□ -0.23
CNOT3-208ENST00000613073 UBE2V1Q13404 147 aa13.59□□□□□ -0.23
CNOT3-208ENST00000613073 DUX4L9Q6RFH8 374 aaPredicted RBP13.59□□□□□ -0.23
CNOT3-208ENST00000613073 ZCCHC24Q8N2G6 241 aaKnown RBP13.59□□□□□ -0.23
CNOT3-208ENST00000613073 YLPM1P49750 1951 aaKnown RBP13.58□□□□□ -0.24
CNOT3-208ENST00000613073 TRBV20OR9-2A0A075B6H5 130 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 TRAV38-1A0A0B4J264 116 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 ODAMA1E959 279 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 F6UZH7 168 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 C15orf65H3BRN8 121 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 SPINT2O43291 252 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 AMTP48728 403 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
CNOT3-208ENST00000613073 ATP6V1FQ16864 119 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 C3orf36Q3SXR2 165 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 OR4C5Q8NGB2 326 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
CNOT3-208ENST00000613073 VPS25Q9BRG1 176 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 UQCR10Q9UDW1 63 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 SLC45A2Q9UMX9 530 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 ATRXP46100 2492 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 C17orf98A8MV24 154 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 IGHV1-46P01743 117 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 TMEM108Q6UXF1 575 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 GCM1Q9NP62 436 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 CLN8Q9UBY8 286 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 POLEQ07864 2286 aa13.58□□□□□ -0.24
CNOT3-208ENST00000613073 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 IGLC2P0DOY2 106 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 IGLC3P0DOY3 106 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 FOXL1Q12952 345 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 Q8N976 141 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 ORAOV1Q8WV07 137 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 PARD6GQ9BYG4 376 aaPredicted RBP13.57□□□□□ -0.24
CNOT3-208ENST00000613073 GNG12Q9UBI6 72 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 SNURFLB1AK76 121 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 S1PR2O95136 353 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 LHBP01229 141 aa13.57□□□□□ -0.24
CNOT3-208ENST00000613073 DPRXA6NFQ7 191 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 LINC00473A8K010 186 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 SLC25A6P12236 298 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 COL8A2P25067 703 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 CFHR2P36980 270 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 CTRLP40313 264 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 BRWD1-AS2P59051 145 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 SLC35B1P78383 322 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 CCL8P80075 99 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 HLA-DRB5Q30154 266 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 RNF2Q99496 336 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 MGST3O14880 152 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 YPEL3P61236 119 aaPredicted RBP13.56□□□□□ -0.24
CNOT3-208ENST00000613073 BSPH1Q075Z2 132 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 NRN1Q9NPD7 142 aa13.56□□□□□ -0.24
CNOT3-208ENST00000613073 CDC34P49427 236 aaPredicted RBP13.55□□□□□ -0.24
CNOT3-208ENST00000613073 UTF1Q5T230 341 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 FAM19A2Q8N3H0 131 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 ZNF738Q8NE65 137 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 OR10G8Q8NGN5 311 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 LEAP2Q969E1 77 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 FAM234AQ9H0X4 552 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 PIGBOS1A0A0B4J2F0 54 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 GFRA3O60609 400 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 THBDP07204 575 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
CNOT3-208ENST00000613073 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 ZBTB34Q8NCN2 500 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 ST6GALNAC3Q8NDV1 305 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 PPP1R35Q8TAP8 253 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 RCHY1Q96PM5 261 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 RNF7Q9UBF6 113 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 COX11Q9Y6N1 276 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 CHD8Q9HCK8 2581 aa13.55□□□□□ -0.24
CNOT3-208ENST00000613073 GPX1P07203 203 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 CATR1Q13166 79 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 FBLN7Q53RD9 439 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 FAM90A1Q86YD7 464 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 OCC1Q8TAD7 63 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 IL19Q9UHD0 177 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 DYSFO75923 2080 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 NTF3P20783 257 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 NHLH1Q02575 133 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 VAMP3Q15836 100 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 CLEC2AQ6UVW9 174 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 SCO2A0A1W2PP80 73 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 ADH4P08319 380 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 HTD2P86397 168 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 ZDHHC16Q969W1 377 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 CCL13Q99616 98 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 ZNF835Q9Y2P0 537 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 RAXQ9Y2V3 346 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 MSRB2Q9Y3D2 182 aa13.54□□□□□ -0.24
CNOT3-208ENST00000613073 LRBAP50851 2863 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 GPR12P47775 334 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 ZNF134P52741 427 aa13.53□□□□□ -0.24
CNOT3-208ENST00000613073 MORN2Q502X0 79 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms