RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 K7EP13 123 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 SLC25A20O43772 301 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 CSRP3P50461 194 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 LPAL2Q16609 132 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 OR9G1Q8NH87 305 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 DEFB108AA8MXU0 73 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 MGST3O14880 152 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 GFRA4Q9GZZ7 299 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 SIVA1O15304 175 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 ZXDCQ2QGD7 858 aaPredicted RBP7.5□□□□□ -1.21
TTC28-208ENST00000612946 KHDC1LQ5JSQ8 128 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 TFPI2P48307 235 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 UTF1Q5T230 341 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 SARGQ9BW04 601 aa7.5□□□□□ -1.21
TTC28-208ENST00000612946 LMO7DNF2Z398 122 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CXCL13O43927 109 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CXCL12P48061 93 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 EPDR1Q9UM22 224 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 GCSAMLQ5JQS6 135 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 ZNF441Q8N8Z8 693 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 KIR3DL3Q8N743 410 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 SSBP3Q9BWW4 388 aaPredicted RBP7.49□□□□□ -1.21
TTC28-208ENST00000612946 PCDH15Q96QU1 1955 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 LHX9Q9NQ69 397 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 EREGO14944 169 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 IGHG4P01861 327 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 FBXW9Q5XUX1 488 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 DNAJC30Q96LL9 226 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CX3CL1P78423 397 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 TAL2Q16559 108 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 SEPSECSQ9HD40 501 aaKnown RBP7.49□□□□□ -1.21
TTC28-208ENST00000612946 WNT5AP41221 380 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 NABP2Q9BQ15 211 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 JPT1Q9UK76 154 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 M0R1B8 84 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 M0R2P5 195 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CEACAM5P06731 702 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 GFI1BQ5VTD9 330 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 ELSPBP1Q96BH3 223 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 HILPDAQ9Y5L2 63 aa7.49□□□□□ -1.21
TTC28-208ENST00000612946 CNTFRP26992 372 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 ZFP36L2P47974 494 aaKnown RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 NRN1LQ496H8 165 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 INO80CQ6PI98 192 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 KLF4O43474 513 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 TBX6O95947 436 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 COX14Q96I36 57 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 ZNF488Q96MN9 340 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 RTBDNQ9BSG5 229 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 RNF126Q9BV68 326 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 FOXL2P58012 376 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 PGPA6NDG6 321 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 ZNF385AQ96PM9 386 aaKnown RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 SLC25A15Q9Y619 301 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 RTN4RL2Q86UN3 420 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 ZNF525Q8N782 197 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 ST6GALNAC6Q969X2 333 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 CCL26Q9Y258 94 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 COL5A3P25940 1745 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 TNFAIP6P98066 277 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 TCF19Q9Y242 345 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 DENND4CQ5VZ89 1909 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 COL18A1P39060 1754 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 PTPRQQ9UMZ3 2332 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 LAGE3Q14657 143 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 BCL6BQ8N143 479 aaPredicted RBP7.48□□□□□ -1.21
TTC28-208ENST00000612946 DTX4Q9Y2E6 619 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 MGAMO43451 1857 aa7.48□□□□□ -1.21
TTC28-208ENST00000612946 SRD5A1P18405 259 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 PSG3Q16557 428 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 EBLN2Q6P2I7 272 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 RLFQ13129 1914 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 RNF115Q9Y4L5 304 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 PRRG2O14669 202 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 UNQ5815/PRO19632Q6UWF5 114 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ONECUT1Q9UBC0 465 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 SONP18583 2426 aaKnown RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 IGFBP3P17936 291 aaPredicted RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 RPL27AP46776 148 aaKnown RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 MNX1P50219 401 aaPredicted RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 AGRNO00468 2067 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 ZNF106Q9H2Y7 1883 aaKnown RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 IGHV3-9P01782 118 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 IL6RP08887 468 aaPredicted RBP7.47□□□□□ -1.21
TTC28-208ENST00000612946 CXCL1P09341 107 aa7.47□□□□□ -1.21
TTC28-208ENST00000612946 RTP5Q14D33 572 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms