RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 FABP4P15090 132 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 LINC01551Q86U37 167 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 LINC01560Q8TB33 94 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 IGFBPL1Q8WX77 278 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 HARBI1Q96MB7 349 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 ZNF714Q96N38 554 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 LINC00312Q9Y6C7 94 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 DVL1O14640 695 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 HRASP01112 189 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 FAM78BQ5VT40 261 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 HIST3H2BBQ8N257 126 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 PFDN5Q99471 154 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 TMEM106BQ9NUM4 274 aa11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 SPTBN1Q01082 2364 aaKnown RBP11.45□□□□□ -0.58
PCDHGA3-202ENST00000612467 REG1AP05451 166 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 TMPRSS3P57727 454 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR2T6Q8NHC8 308 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 CORO2AQ92828 525 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 DYNLRB1Q9NP97 96 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 SHISA9B4DS77 424 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 ITGB1BP1O14713 200 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 RTL8BQ17RB0 113 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 RNASE6Q93091 150 aaKnown RBP11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 CTDSP1Q9GZU7 261 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 H0YJW9 148 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 PPP1R2P9O14990 202 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR10J4P0C629 311 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 LINC00869P0C866 280 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 UNQ6494/PRO21346Q6UXR6 183 aa11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 GAR1Q9NY12 217 aaKnown RBP11.44□□□□□ -0.58
PCDHGA3-202ENST00000612467 AKAP6Q13023 2319 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 A0A1B0GUS0 222 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 LY6HO94772 140 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 GCHFRP30047 84 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR10J1P30954 320 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR5B12Q96R08 314 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 LINC00574Q9H8X3 128 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 FUT9Q9Y231 359 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 MPDU1O75352 247 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 GAMTQ14353 236 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 CDSNQ15517 529 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 RAB1CQ92928 201 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 ACY3Q96HD9 319 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 ELOVL5Q9NYP7 299 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 JKAMPQ9P055 326 aa11.43□□□□□ -0.58
PCDHGA3-202ENST00000612467 COL12A1Q99715 3063 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 S100A2P29034 98 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 OCC1Q8TAD7 63 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 ADTRPQ96IZ2 230 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 TRAV5A0A0B4J249 113 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 CGB1A6NKQ9 187 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 CXorf1O96002 111 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 NUBP1P53384 320 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 HLA-DRB5Q30154 266 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 NABP2Q9BQ15 211 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 GAL3ST2Q9H3Q3 398 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 KCNIP2Q9NS61 270 aa11.42□□□□□ -0.58
PCDHGA3-202ENST00000612467 PPP5D1E7EU14 171 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 SLC17A3O00476 420 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 NDUFB3O43676 98 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 FRMD6-AS1P0C7T7 363 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRR20EP86478 221 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRR20CP86479 221 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRR20DP86480 221 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRR20BP86481 221 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PRR20AP86496 221 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 PSG5Q15238 335 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 POU2AF1Q16633 256 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 SRD5A3Q9H8P0 318 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 MRPL36Q9P0J6 103 aaKnown RBP11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 IGHV3-21A0A0B4J1V1 117 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 CNTFRP26992 372 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR5I1Q13606 314 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 TCEAL7Q9BRU2 100 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 RAB9BQ9NP90 201 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 ZNF835Q9Y2P0 537 aa11.41□□□□□ -0.58
PCDHGA3-202ENST00000612467 K7EN84 100 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms