RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	TMEM178B	H3BS89	294 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	PAGE4	O60829	102 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	PPOX	P50336	477 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	TEX36	Q5VZQ5	186 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	STUM	Q69YW2	141 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	MRPL41	Q8IXM3	137 aa	Known RBP	11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	SMG1	Q96Q15	3661 aa	Known RBP	11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	DDB2	Q92466	427 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	RAB1C	Q92928	201 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	CFAP46	Q8IYW2	2715 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	C11orf94	C9JXX5	98 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	CDC34	P49427	236 aa	Predicted RBP	11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	NUTF2	P61970	127 aa	Known RBP	11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	RELB	Q01201	579 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	NEU1	Q99519	415 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	CCL13	Q99616	98 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	KCNIP2	Q9NS61	270 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	WDR83OS	Q9Y284	106 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	DYSF	O75923	2080 aa		11.36	□□□□□ -0.59
COPS7B-223	ENST00000611614	TRGV10	A0A0A0MS01	117 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	C19orf84	I3L1E1	186 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	VDAC2	P45880	294 aa	Predicted RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	RPL15	P61313	204 aa	Known RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	FOXL1	Q12952	345 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	CT45A1	Q5HYN5	189 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	TMEM144	Q7Z5S9	345 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	MRPL52	Q86TS9	123 aa	Known RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	OR4S2	Q8NH73	311 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	CT45A3	Q8NHU0	189 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	GAFA1	Q96PS6	74 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	TMEM140	Q9NV12	185 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	TCAP	O15273	167 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	HMGB3	O15347	200 aa	Known RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	IL3RA	P26951	378 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	CD1B	P29016	333 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	UTF1	Q5T230	341 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	VKORC1L1	Q8N0U8	176 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	GATAD1	Q8WUU5	269 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	LEAP2	Q969E1	77 aa		11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	HEYL	Q9NQ87	328 aa	Predicted RBP	11.35	□□□□□ -0.59
COPS7B-223	ENST00000611614	DOCK11	Q5JSL3	2073 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZNF788	Q6ZQV5	615 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	LINC01551	Q86U37	167 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	FKBP11	Q9NYL4	201 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	SAA2-SAA4	A0A096LPE2	208 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	TRAV3	A0A0B4J244	114 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	SAA2	P0DJI9	122 aa	Predicted RBP	11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	IGFBP2	P18065	325 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	THBS3	P49746	956 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	ERVFC1-1	P60608	527 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	C1orf194	Q5T5A4	169 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	FAM78B	Q5VT40	261 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	TGIF2LX	Q8IUE1	241 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614		Q8N7P7	452 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	UBTD1	Q9HAC8	227 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	TRAPPC1	Q9Y5R8	145 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	PXMP4	Q9Y6I8	212 aa		11.34	□□□□□ -0.59
COPS7B-223	ENST00000611614	ARFGEF3	Q5TH69	2177 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	TRAV9-1	A0A075B6T8	112 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614		A6NNC1	897 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	MPDU1	O75352	247 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	SNRPC	P09234	159 aa	Known RBP	11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	IDI2-AS1	Q9NZ38	188 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	KIR2DL5B	A0A0G2JN68	375 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	KIR2DL5B	A0A0G2JPC4	375 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	OR10J1	P30954	320 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	MRPS11	P82912	194 aa	Known RBP	11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	TCF23	Q7RTU1	214 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	KIR2DL5A	Q8N109	375 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	FAM216B	Q8N7L0	139 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	ZNF439	Q8NDP4	499 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	NEU4	Q8WWR8	484 aa	Predicted RBP	11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	ADTRP	Q96IZ2	230 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	LINC00574	Q9H8X3	128 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	TCF19	Q9Y242	345 aa		11.33	□□□□□ -0.6
COPS7B-223	ENST00000611614	DSCAM	O60469	2012 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614		A0A0U1RQK1	487 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	ZNF320	A2RRD8	509 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614		M0R143	59 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	RRH	O14718	337 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	GOSR1	O95249	250 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	NPPC	P23582	126 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	CHRNA7	P36544	502 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	TMEM30B	Q3MIR4	351 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	CORO2A	Q92828	525 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	C15orf61	A6NNL5	157 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	PRSS46	E5RG02	174 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	GNB1	P62873	340 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	CLEC12B	Q2HXU8	276 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	LRRC10	Q5BKY1	277 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	DTX2	Q86UW9	622 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	LYG1	Q8N1E2	194 aa		11.32	□□□□□ -0.6
COPS7B-223	ENST00000611614	MDFIC2	A0A1B0GVS7	189 aa		11.31	□□□□□ -0.6
COPS7B-223	ENST00000611614	NDUFB3	O43676	98 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms