RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 NPVFQ9HCQ7 196 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 OR51B2Q9Y5P1 312 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 NOTCH2Q04721 2471 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 M0QZ24 198 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 CHEK1O14757 476 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 NUPR1O60356 82 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 IL6RP08887 468 aaPredicted RBP7.99□□□□□ -1.13
TPM1-233ENST00000610733 MMDQ15546 238 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 FDCSPQ8NFU4 85 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 OR4S2Q8NH73 311 aa7.99□□□□□ -1.13
TPM1-233ENST00000610733 PSMG3Q9BT73 122 aaPredicted RBP7.99□□□□□ -1.13
TPM1-233ENST00000610733 OTOGLQ3ZCN5 2332 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 GCHFRP30047 84 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 CCKARP32238 428 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 CDKN1AP38936 164 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 GFRA1P56159 465 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 ZNF497Q6ZNH5 498 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 FAM214BQ7L5A3 538 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 SNHG12Q9BXW3 62 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 TBL2Q9Y4P3 447 aaKnown RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 RBFOX2O43251 390 aaKnown RBP eCLIP7.98□□□□□ -1.13
TPM1-233ENST00000610733 PYYP10082 97 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 KLF3P57682 345 aaPredicted RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 ERHP84090 104 aaKnown RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 IBA57Q5T440 356 aaKnown RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 DUX4L9Q6RFH8 374 aaPredicted RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 CISD2Q8N5K1 135 aaKnown RBP7.98□□□□□ -1.13
TPM1-233ENST00000610733 OR1L4Q8NGR5 311 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 DNAJC4Q9NNZ3 241 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 SPTBN4Q9H254 2564 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 TMEM250H0YL14 139 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 LINC00869P0C866 280 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 TAS2R45P59539 299 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 GNG5P63218 68 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 SSX8Q7RTT4 187 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 RNF2Q99496 336 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 SPRR3Q9UBC9 169 aa7.98□□□□□ -1.13
TPM1-233ENST00000610733 GCGP01275 180 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 LYZP61626 148 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 OR8G5Q8NG78 346 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 OR2T6Q8NHC8 308 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 SARAFQ96BY9 339 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 NABP2Q9BQ15 211 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 LOC389332A0A1B0GUA5 103 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A10PA6NDY2 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A18PA6NE21 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A16PA6NEW6 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A20PA6NIJ5 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A8PA6NJQ4 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A7PA6NKC0 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A22PA8MWA6 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A12PA8MX19 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A5PA8MXJ8 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A23PA8MXZ1 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A15PP0C7V4 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A13PP0C7W8 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A14PP0C7W9 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 FAM90A24PP0C7X0 464 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 BCL2L2Q92843 193 aaPredicted RBP7.97□□□□□ -1.13
TPM1-233ENST00000610733 EAF1Q96JC9 268 aaPredicted RBP7.97□□□□□ -1.13
TPM1-233ENST00000610733 CALYQ9NYX4 217 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 SEMA5BQ9P283 1151 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 TNXAQ16473 311 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 ACP7Q6ZNF0 438 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 ZNF596Q8TC21 504 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 NPIPB3Q92617 1050 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 SAP30LQ9HAJ7 183 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 SLC45A2Q9UMX9 530 aa7.97□□□□□ -1.13
TPM1-233ENST00000610733 SLC25A17O43808 307 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 CCL3L1P16619 93 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 OR4C5Q8NGB2 326 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 RNASE8Q8TDE3 154 aaKnown RBP7.96□□□□□ -1.13
TPM1-233ENST00000610733 TMEM170AQ8WVE7 144 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 MBD3L1Q8WWY6 194 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 COQ2Q96H96 371 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 PKIBQ9C010 78 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 DMXL2Q8TDJ6 3036 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 FBLL1A6NHQ2 334 aaKnown RBP7.96□□□□□ -1.13
TPM1-233ENST00000610733 TECTAO75443 2155 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 IGLV3-1P01715 115 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 APCSP02743 223 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 PFN1P07737 140 aaKnown RBP7.96□□□□□ -1.13
TPM1-233ENST00000610733 WDR82Q6UXN9 313 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 SCRT1Q9BWW7 348 aa7.96□□□□□ -1.13
TPM1-233ENST00000610733 YTHDF2Q9Y5A9 579 aaKnown RBP7.96□□□□□ -1.13
TPM1-233ENST00000610733 SORL1Q92673 2214 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 MLNRO43193 412 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 BRS3P32247 399 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 UQCRFS1P47985 274 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 RELBQ01201 579 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 Q6P435 159 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 ODF3L1Q8IXM7 274 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 WASHC3Q9Y3C0 194 aa7.96□□□□□ -1.14
TPM1-233ENST00000610733 BMPR1BO00238 502 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms