RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 PTPRDP23468 1912 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 TRBV9A0A0B4J1U6 114 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 DLX1P56177 255 aa11.91□□□□□ -0.5
PCDHB16-201ENST00000609684 UPK2O00526 184 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 PSMB2P49721 201 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 LRTM2Q8N967 370 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 WFDC1Q9HC57 220 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 FGF16O43320 207 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 PMCHL1Q16048 86 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 RTN4RL2Q86UN3 420 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 MPDZO75970 2070 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 IL18BPO95998 194 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 CLDN16Q9Y5I7 305 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
PCDHB16-201ENST00000609684 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 OTX1P32242 354 aaPredicted RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 RPL24P83731 157 aaKnown RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 MGAMO43451 1857 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 FOXI3A8MTJ6 420 aaPredicted RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 DUTP33316 252 aaKnown RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 PLAURQ03405 335 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 OR52E5Q8NH55 327 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 PHF3Q92576 2039 aaKnown RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 MAP1LC3AQ9H492 121 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 TSC2P49815 1807 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 PEX7O00628 323 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 DDTP30046 118 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 COL5A1-AS1Q5SY13 56 aa11.89□□□□□ -0.51
PCDHB16-201ENST00000609684 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 RBFOX2O43251 390 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 MBNL2Q5VZF2 373 aaKnown RBP11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 FBXL7Q9UJT9 491 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 AUP1Q9Y679 476 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 HBBP68871 147 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 MYO7BQ6PIF6 2116 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 IL36BQ9NZH7 164 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 CACNA1HO95180 2353 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 MYLKQ15746 1914 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 TRGV3P03979 118 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 GPX1P07203 203 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 PKDREJQ9NTG1 2253 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 PSPNO60542 156 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 OR9G9P0C7N8 305 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 CDKN1AP38936 164 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
PCDHB16-201ENST00000609684 A0A087WWC5 75 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 RSPO3Q9BXY4 272 aaPredicted RBP11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 SELLP14151 372 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 CCL20P78556 96 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 SIAH2O43255 324 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 FOLR2P14207 255 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 RPL23P62829 140 aaKnown RBP11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 QRFPP83859 136 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 ARPC1AQ92747 370 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 PLSCR4Q9NRQ2 329 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 RAXQ9Y2V3 346 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 ZNF207O43670 478 aaKnown RBP11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 DLX6P56179 175 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
PCDHB16-201ENST00000609684 M0R3E3 92 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 TMEM133Q9H2Q1 129 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 NAPSAO96009 420 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 GPR183P32249 361 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 TMEM42Q69YG0 159 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 SPACA3Q8IXA5 215 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 MDS2Q8NDY4 140 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 UQCR10Q9UDW1 63 aa11.86□□□□□ -0.51
PCDHB16-201ENST00000609684 SRSF7Q16629 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms