RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 TMEM128Q5BJH2 165 aa10.96□□□□□ -0.65
HDDC2-209ENST00000609477 ZNF114Q8NC26 417 aa10.96□□□□□ -0.65
HDDC2-209ENST00000609477 OR1P1Q8NH06 330 aa10.96□□□□□ -0.65
HDDC2-209ENST00000609477 C7orf50Q9BRJ6 194 aaKnown RBP10.96□□□□□ -0.65
HDDC2-209ENST00000609477 PDCD10Q9BUL8 212 aa10.96□□□□□ -0.65
HDDC2-209ENST00000609477 HINT2Q9BX68 163 aa10.96□□□□□ -0.65
HDDC2-209ENST00000609477 AURKAIP1Q9NWT8 199 aaPredicted RBP10.96□□□□□ -0.65
HDDC2-209ENST00000609477 A0A0B4J293 547 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 DBX1A6NMT0 343 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 GGCTO75223 188 aaKnown RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 NDUFB8O95169 186 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 RBMS2Q15434 407 aaKnown RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 BAK1Q16611 211 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 CNPY1Q3B7I2 92 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 SELENOHQ8IZQ5 122 aaKnown RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 OR2C3Q8N628 320 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 OR52E5Q8NH55 327 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 RNASE11Q8TAA1 199 aaKnown RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 TMEM230Q96A57 120 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 OR4C12Q96R67 309 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 PLEKHA3Q9HB20 300 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 BATF3Q9NR55 127 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.95□□□□□ -0.66
HDDC2-209ENST00000609477 SIGLEC8Q9NYZ4 499 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 PEMTQ9UBM1 199 aa10.95□□□□□ -0.66
HDDC2-209ENST00000609477 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 DUXBA0A1W2PPF3 345 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 BMPR1BO00238 502 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 SAP30O75446 220 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 AKR1C4P17516 323 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 UBE2MP61081 183 aaKnown RBP10.94□□□□□ -0.66
HDDC2-209ENST00000609477 DEFA5Q01523 94 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 TMEM187Q14656 261 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 TMEM268Q5VZI3 342 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 SLC25A24Q6NUK1 477 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 GPHB5Q86YW7 130 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 OR9G4Q8NGQ1 327 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 SDHCQ99643 169 aaPredicted RBP10.94□□□□□ -0.66
HDDC2-209ENST00000609477 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
HDDC2-209ENST00000609477 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 DMRT1Q9Y5R6 373 aa10.94□□□□□ -0.66
HDDC2-209ENST00000609477 DNAH3Q8TD57 4116 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 LGALS9O00182 355 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 IFNA17P01571 189 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 TRBV12-3P01733 135 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 SUB1P53999 127 aaKnown RBP eCLIP10.93□□□□□ -0.661e-323■■■■■ 87.7
HDDC2-209ENST00000609477 SPCS3P61009 180 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 SUPT4H1P63272 117 aaKnown RBP10.93□□□□□ -0.66
HDDC2-209ENST00000609477 C19orf35Q6ZS72 473 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 LGI3Q8N145 548 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 SLC35G3Q8N808 338 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 LHFPL5Q8TAF8 219 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 ZNF502Q8TBZ5 544 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 S100ZQ8WXG8 99 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 CCDC140Q96MF4 163 aa10.93□□□□□ -0.66
HDDC2-209ENST00000609477 CLEC3BP05452 202 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 IL7P13232 177 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 ARL3P36405 182 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 SNCAP37840 140 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 CLEC19AQ6UXS0 136 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 LRTM2Q8N967 370 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 CCDC32Q9BV29 185 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
HDDC2-209ENST00000609477 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
HDDC2-209ENST00000609477 MFSD2BA6NFX1 497 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 CORTO00230 105 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 NDUFB6O95139 128 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 FCGR2BP31994 310 aaPredicted RBP10.91□□□□□ -0.66
HDDC2-209ENST00000609477 CCR6P51684 374 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 IZUMO4Q1ZYL8 232 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 Q6ZRM9 215 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 TMED4Q7Z7H5 227 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 BSCL2Q96G97 398 aaPredicted RBP10.91□□□□□ -0.66
HDDC2-209ENST00000609477 TXN2Q99757 166 aa10.91□□□□□ -0.66
HDDC2-209ENST00000609477 A0A0G2JRQ6 117 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 PRB2P02812 416 aaPredicted RBP10.9□□□□□ -0.66
HDDC2-209ENST00000609477 SULT1A3P0DMM9 295 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 SULT1A4P0DMN0 295 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 MFAP2P55001 183 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 PVRIGQ6DKI7 326 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 PLET1Q6UQ28 207 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 IL34Q6ZMJ4 242 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 OR2K2Q8NGT1 345 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 GPR146Q96CH1 333 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 C21orf62Q9NYP8 219 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 PTTG2Q9NZH5 202 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 CACNG5Q9UF02 275 aa10.9□□□□□ -0.66
HDDC2-209ENST00000609477 A0A1B0GU03 582 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 WI2-2373I1.2A0A1W2PRP0 233 aa10.89□□□□□ -0.67
HDDC2-209ENST00000609477 PPP5D1E7EU14 171 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms