RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 C15orf61A6NNL5 157 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 VBP1P61758 197 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 TSPAN5P62079 268 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 Q56UQ5 140 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 CADM3Q8N126 398 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 ZNF414Q96IQ9 312 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 SPAG8Q99932 426 aaPredicted RBP11.9□□□□□ -0.5
SGMS1-209ENST00000609445 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 PRNDQ9UKY0 176 aa11.9□□□□□ -0.5
SGMS1-209ENST00000609445 NDUFA4O00483 81 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 TSPAN4O14817 238 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 ODF3L2Q3SX64 289 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 SPSB3Q6PJ21 355 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 SLC38A6Q8IZM9 456 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 SEC22AQ96IW7 307 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 FUNDC2Q9BWH2 189 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
SGMS1-209ENST00000609445 HPGDSO60760 199 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 APOA1P02647 267 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 CTSGP08311 255 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 ELK1P19419 428 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.518e-7■■■□□ 16.1
SGMS1-209ENST00000609445 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
SGMS1-209ENST00000609445 MISP3Q96FF7 219 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 ATP6V0BQ99437 205 aa11.88□□□□□ -0.51
SGMS1-209ENST00000609445 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 M0QYG6 137 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
SGMS1-209ENST00000609445 RCVRNP35243 200 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 IZUMO4Q1ZYL8 232 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 DEFB135Q30KP9 77 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 LPCAT3Q6P1A2 487 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 TSC22D3Q99576 134 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 SCPEP1Q9HB40 452 aa11.87□□□□□ -0.51
SGMS1-209ENST00000609445 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 A0A0J9YWU9 116 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 I3L2K1 104 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 K7EMT4 169 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 RPL35AP18077 110 aaKnown RBP11.86□□□□□ -0.51
SGMS1-209ENST00000609445 S100GP29377 79 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 UCP3P55916 312 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
SGMS1-209ENST00000609445 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
SGMS1-209ENST00000609445 OR4C46A6NHA9 309 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 SPRY2O43597 315 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 MT-CO2P00403 227 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 PI3P19957 117 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 APOC4P55056 127 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 MFAP4P55083 255 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 PRCDQ00LT1 54 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 CMTM3Q96MX0 182 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 RNF2Q99496 336 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 RHPN1-AS1Q9BWJ2 59 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 NAA50Q9GZZ1 169 aaKnown RBP11.85□□□□□ -0.51
SGMS1-209ENST00000609445 SMPXQ9UHP9 88 aa11.85□□□□□ -0.51
SGMS1-209ENST00000609445 IGKV3-7A0A075B6H7 116 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 IGHV3OR16-13A0A075B7E8 117 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 IGHV3-74A0A0B4J1X5 117 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 IGHV7-4-1A0A0J9YVY3 117 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 C15orf62A8K5M9 175 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 CHEK1O14757 476 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 NUPL2O15504 423 aaKnown RBP11.84□□□□□ -0.51
SGMS1-209ENST00000609445 YIF1AO95070 293 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 PGAM2P15259 253 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 TFPI2P48307 235 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 ZNF124Q15973 351 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 Q6ZWC4 215 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
SGMS1-209ENST00000609445 CXorf65A6NEN9 183 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 FAM25AB3EWG3 89 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 FAM25CB3EWG5 89 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 FAM25GB3EWG6 89 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 IGKV1-5P01602 117 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
SGMS1-209ENST00000609445 RELQ04864 619 aaPredicted RBP11.83□□□□□ -0.52
SGMS1-209ENST00000609445 STPG3Q8N7X2 389 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 ZNF114Q8NC26 417 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 TMEM116Q8NCL8 245 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 PINX1Q96BK5 328 aaKnown RBP11.83□□□□□ -0.52
SGMS1-209ENST00000609445 NXF2Q9GZY0 626 aaKnown RBP11.83□□□□□ -0.52
SGMS1-209ENST00000609445 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
SGMS1-209ENST00000609445 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
SGMS1-209ENST00000609445 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms