RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 C2orf91Q6ZV80 131 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 BPIFA4PQ86YQ2 179 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SFTPA2Q8IWL1 248 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SFTPA1Q8IWL2 248 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 BOD1L2Q8IYS8 172 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR8I2Q8N0Y5 310 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 GCSAMQ8N6F7 178 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TEX45Q8NA69 505 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 GATSQ8NAP1 163 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR10AG1Q8NH19 301 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR4A5Q8NH83 315 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 OR1L1Q8NH94 360 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CT45A3Q8NHU0 189 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 ZNF418Q8TF45 676 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 BLNKQ8WV28 456 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 H1FXQ92522 213 aaKnown RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 NAT6Q93015 286 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM54Q969K7 222 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SPTSSAQ969W0 71 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TMEM45BQ96B21 275 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 BORCS8Q96FH0 119 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 RAX2Q96IS3 184 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 DERL1Q9BUN8 251 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 C19orf24Q9BVV8 132 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 GEMIN7Q9H840 131 aaKnown RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SLC25A22Q9H936 323 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 MRPL16Q9NX20 251 aaKnown RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TBC1D29Q9UFV1 150 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 BOKQ9UMX3 212 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 CCL26Q9Y258 94 aa3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 SOX21Q9Y651 276 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P50-201ENST00000605814 TNRC6AQ8NDV7 1962 aaKnown RBP3.34□□□□□ -1.88
HMGB1P50-201ENST00000605814 RTTNQ86VV8 2226 aa3.34□□□□□ -1.88
HMGB1P50-201ENST00000605814 NCKAP5O14513 1909 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIAA1549Q9HCM3 1950 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRGV11A0A075B6L2 103 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGKV3D-11A0A0A0MRZ8 115 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 UBE2L5PA0A1B0GUS4 154 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1B0GXF2 115 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 VSTM5A8MXK1 200 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 H3BP45 60 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 DHHO43323 396 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 IGLV2-8P01709 118 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CXCL10P02778 98 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 HNRNPA1P09651 372 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FRMD6-AS1P0C7T7 363 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CT45A10P0DMU9 189 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 HIST1H1EP10412 219 aaKnown RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FGF6P10767 208 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 IAPPP10997 89 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FABP2P12104 132 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 USF1P22415 310 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 HTR1DP28221 377 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 IL12BP29460 328 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 GCHFRP30047 84 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FGF12P61328 243 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CEACAM21Q3KPI0 293 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TIGITQ495A1 244 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FAM27BQ5VT28 67 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CCDC144NLQ6NUI1 221 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF788Q6ZQV5 615 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TTC9CQ8N5M4 171 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TPRX1Q8N7U7 411 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TSTD1Q8NFU3 115 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR52E5Q8NH55 327 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR2AE1Q8NHA4 323 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 OR1F12Q8NHA8 337 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 GTSF1Q8WW33 167 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 PIGTQ969N2 578 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CLDN23Q96B33 292 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 URB1-AS1Q96HZ7 61 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 GPR82Q96P67 336 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TRIB1Q96RU8 372 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 VGLL1Q99990 258 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 MAP1LC3CQ9BXW4 147 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM133Q9H2Q1 129 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 MS4A5Q9H3V2 200 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 ZNF442Q9H7R0 627 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 METTL7AQ9H8H3 244 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TMEM167BQ9NRX6 74 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 LIN7CQ9NUP9 197 aaKnown RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 MED29Q9NX70 200 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 TECRQ9NZ01 308 aaKnown RBP3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 HSPB8Q9UJY1 196 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 CYSLTR1Q9Y271 337 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 LOXL2Q9Y4K0 774 aa3.33□□□□□ -1.88
HMGB1P50-201ENST00000605814 EML6Q6ZMW3 1958 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 KIR2DS5A0A0G2JLQ3 304 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A0G2JNG1 304 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 TEX48A0A1B0GUV7 120 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 A0A1W2PRE2 83 aa3.32□□□□□ -1.88
HMGB1P50-201ENST00000605814 C5orf63A6NC05 138 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms