RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 HIST2H2BEQ16778 126 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.71■□□□□ 0.43
SH3D19-211ENST00000604030 PEAR1Q5VY43 1037 aaPredicted RBP17.71■□□□□ 0.43
SH3D19-211ENST00000604030 FER1L6-AS1Q8NA97 138 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 HIST1H2BHQ93079 126 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 HIST1H2BNQ99877 126 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 HIST1H2BMQ99879 126 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 JKAMPQ9P055 326 aa17.71■□□□□ 0.43
SH3D19-211ENST00000604030 IGHV2OR16-5A0A0B4J2B6 119 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 ZNHIT1O43257 154 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 PPBPP02775 128 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 PSG7Q13046 419 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 LHFPL1Q86WI0 220 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 NEU4Q8WWR8 484 aaPredicted RBP17.71■□□□□ 0.42
SH3D19-211ENST00000604030 WDR83OSQ9Y284 106 aa17.71■□□□□ 0.42
SH3D19-211ENST00000604030 A0A0G2JLM5 398 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 GPR183P32249 361 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 ATP5L2Q7Z4Y8 100 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 TMEM74BQ9NUR3 256 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 TRAV9-2A0A087WT02 112 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 TRAV8-6A0A0B4J262 113 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 IGKV1-9A0A0C4DH69 117 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 LINC01549A6NIU2 74 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 PAQR4Q8N4S7 273 aaPredicted RBP17.7■□□□□ 0.42
SH3D19-211ENST00000604030 SCGB3A1Q96QR1 104 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 NPFFO15130 113 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 CEACAM1P13688 526 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 ASCL2Q99929 193 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 Q9H3A6 140 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 DMRTA1Q5VZB9 504 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 KLK15Q9H2R5 256 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 SPCS1Q9Y6A9 102 aa17.7■□□□□ 0.42
SH3D19-211ENST00000604030 PTPRZ1P23471 2315 aaPredicted RBP17.69■□□□□ 0.42
SH3D19-211ENST00000604030 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 UNC13CQ8NB66 2214 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 HIGD1CA8MV81 97 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 EMP1P54849 157 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 CHCHD1Q96BP2 118 aaKnown RBP17.69■□□□□ 0.42
SH3D19-211ENST00000604030 SLC50A1Q9BRV3 221 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 GFI1Q99684 422 aa17.69■□□□□ 0.42
SH3D19-211ENST00000604030 FAM166AQ6J272 317 aa17.68■□□□□ 0.42
SH3D19-211ENST00000604030 PLPPR1Q8TBJ4 325 aa17.68■□□□□ 0.42
SH3D19-211ENST00000604030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.68■□□□□ 0.42
SH3D19-211ENST00000604030 CEACAM4O75871 244 aa17.68■□□□□ 0.42
SH3D19-211ENST00000604030 H3BRM9 83 aa17.68■□□□□ 0.42
SH3D19-211ENST00000604030 TMEM170BQ5T4T1 132 aa17.68■□□□□ 0.42
SH3D19-211ENST00000604030 IGKV1D-13A0A0B4J2D9 117 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 IGKV1-13P0DP09 117 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 FOXC2Q99958 501 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 C2orf88Q9BSF0 95 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 FBXL7Q9UJT9 491 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 A0A1B0GWB2 263 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 ADMP35318 185 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 FLVCR1-AS1Q8TAF5 88 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
SH3D19-211ENST00000604030 LYZL4Q96KX0 146 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 SIGLEC12Q96PQ1 595 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 DUX5Q96PT3 197 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 SBF2Q86WG5 1849 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 SP9P0CG40 484 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 OR5A1Q8NGJ0 315 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 MRPL20Q9BYC9 149 aaKnown RBP17.66■□□□□ 0.42
SH3D19-211ENST00000604030 FBXL15Q9H469 300 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 ARPC1AQ92747 370 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 NXT2Q9NPJ8 142 aaKnown RBP17.66■□□□□ 0.42
SH3D19-211ENST00000604030 COLCA2A8K830 154 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 RASL11AQ6T310 242 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 EPDR1Q9UM22 224 aa17.66■□□□□ 0.42
SH3D19-211ENST00000604030 LDLRAD4O15165 306 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 SRSF3P84103 164 aaKnown RBP17.65■□□□□ 0.42
SH3D19-211ENST00000604030 SRSF4Q08170 494 aaKnown RBP17.65■□□□□ 0.42
SH3D19-211ENST00000604030 PRCDQ00LT1 54 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 TCRBV4S1A1TA0A5B7 111 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 FABP5P3A8MUU1 101 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 FOXA2Q9Y261 457 aaPredicted RBP17.65■□□□□ 0.42
SH3D19-211ENST00000604030 PRR32B1ATL7 298 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 FOXL1Q12952 345 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 FAM74A4Q5TZK3 123 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 TEX38Q6PEX7 206 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 TNFRSF18Q9Y5U5 241 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 TRGV3P03979 118 aa17.65■□□□□ 0.42
SH3D19-211ENST00000604030 PIKFYVEQ9Y2I7 2098 aa17.64■□□□□ 0.42
SH3D19-211ENST00000604030 EFEMP2O95967 443 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 COX6B1P14854 86 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 CD69Q07108 199 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 MRPL52Q86TS9 123 aaKnown RBP17.64■□□□□ 0.41
SH3D19-211ENST00000604030 PATJQ8NI35 1801 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 HBDP02042 147 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 SAA1P0DJI8 122 aaPredicted RBP17.64■□□□□ 0.41
SH3D19-211ENST00000604030 IGHV1-2P23083 117 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 SLC25A2Q9BXI2 301 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 ST20Q9HBF5 79 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 MORN2Q502X0 79 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 TMEM101Q96IK0 257 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 C18orf15Q96N68 181 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 MS4A6AQ9H2W1 248 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 POLR2AP24928 1970 aaKnown RBP17.64■□□□□ 0.41
SH3D19-211ENST00000604030 IGHV3-48P01763 117 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 CRYGSP22914 178 aa17.64■□□□□ 0.41
SH3D19-211ENST00000604030 HIST3H2BBQ8N257 126 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms