RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 KCNIP3Q9Y2W7 256 aa12.2□□□□□ -0.46
CDCA3-211ENST00000603043 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 A0A1W2PN81 502 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 MSGN1A6NI15 193 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 CHRNA7P36544 502 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 SSTP61278 116 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM128Q5BJH2 165 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 KHDC1LQ5JSQ8 128 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 GLYATL2Q8WU03 294 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 TCRBV4S1A1TA0A5B7 111 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 ATG12O94817 140 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 CDS2O95674 445 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 PVALBP20472 110 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-211ENST00000603043 AKR1C2P52895 323 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 SUPT4H1P63272 117 aaKnown RBP12.19□□□□□ -0.46
CDCA3-211ENST00000603043 FOXE3Q13461 319 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 H2BFWTQ7Z2G1 175 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 SVBPQ8N300 66 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-211ENST00000603043 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
CDCA3-211ENST00000603043 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-211ENST00000603043 OPN1MWP04001 364 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 S100A9P06702 114 aaKnown RBP12.18□□□□□ -0.46
CDCA3-211ENST00000603043 ELANEP08246 267 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 APELAP0DMC3 54 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 OPN1MW2P0DN77 364 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 OPN1MW3P0DN78 364 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 RPL27AP46776 148 aaKnown RBP12.18□□□□□ -0.46
CDCA3-211ENST00000603043 CXorf66Q5JRM2 361 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-211ENST00000603043 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 COMMD5Q9GZQ3 224 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 SOX15O60248 233 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 IGLV1-40P01703 118 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 RLN2P04090 185 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 MYOD1P15172 320 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 PSMB8P28062 276 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 LCNL1Q6ZST4 164 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 NDUFA11Q86Y39 141 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 BPIFCQ8NFQ6 507 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 OR5M8Q8NGP6 311 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 NSG2Q9Y328 171 aa12.18□□□□□ -0.46
CDCA3-211ENST00000603043 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-211ENST00000603043 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 ARPC5O15511 151 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 PF4V1P10720 104 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 VAMP1P23763 118 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM187Q14656 261 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 ASPHD1Q5U4P2 390 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 FLVCR2Q9UPI3 526 aa12.17□□□□□ -0.46
CDCA3-211ENST00000603043 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 E7EUB6 86 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 M0QZ24 198 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
CDCA3-211ENST00000603043 OR2B8PP59922 312 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 C2orf68Q2NKX9 166 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM268Q5VZI3 342 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 RNASE11Q8TAA1 199 aaKnown RBP12.16□□□□□ -0.46
CDCA3-211ENST00000603043 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 A0A1B0GW64 132 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 ADARB2-AS1A8MUL3 147 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 SIX6O95475 246 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 IZUMO4Q1ZYL8 232 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 SELENOHQ8IZQ5 122 aaKnown RBP12.16□□□□□ -0.46
CDCA3-211ENST00000603043 OR5T1Q8NG75 326 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 OR4A16Q8NH70 328 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 CASTOR1Q8WTX7 329 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 TCEAL7Q9BRU2 100 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 KLK15Q9H2R5 256 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
CDCA3-211ENST00000603043 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 P0C879 139 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 S100PP25815 95 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
CDCA3-211ENST00000603043 RPL23AP62750 156 aaKnown RBP12.15□□□□□ -0.46
CDCA3-211ENST00000603043 SRPXP78539 464 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 IL22RA2Q969J5 263 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 QTRT1Q9BXR0 403 aaKnown RBP12.15□□□□□ -0.46
CDCA3-211ENST00000603043 GSN-AS1Q9NRJ2 163 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 ZNF355PQ9NSJ1 428 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
CDCA3-211ENST00000603043 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
CDCA3-211ENST00000603043 DBX1A6NMT0 343 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms