RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	NUDT3	O95989	172 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	SOD3	P08294	240 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	MUC21	Q5SSG8	566 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	ARL6IP6	Q8N6S5	226 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	C17orf100	A8MU93	164 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	ATG101	Q9BSB4	218 aa		10.15	□□□□□ -0.78
PTPN23-206	ENST00000602307	PLXNA3	P51805	1871 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	THSD7B	Q9C0I4	1608 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	FER1L5	A0AVI2	2057 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	ATP5G3	P48201	142 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	CCL19	Q99731	98 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	CBLN4	Q9NTU7	201 aa		10.15	□□□□□ -0.79
PTPN23-206	ENST00000602307	TRGV3	P03979	118 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	AREG	P15514	252 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	CA7	P43166	264 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	BIVM	Q86UB2	503 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	MAP1LC3A	Q9H492	121 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	TRBV6-7	A0A0A0MS04	114 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	HIST1H1A	Q02539	215 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	TSC2	P49815	1807 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	RRN3P1	Q2M238	152 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	EEF1AKMT3	Q96AZ1	226 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	SCO2	A0A1W2PP80	73 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	LYNX1	G3V0Z9	82 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	LYNX1	P0DP58	116 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	ZIC4	Q8N9L1	334 aa		10.14	□□□□□ -0.79
PTPN23-206	ENST00000602307	PCNX1	Q96RV3	2341 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	IGLV3-32	A0A0A0MS00	114 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307		A0A0A6YYD4	124 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	TM4SF5	O14894	197 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	CD55	P08174	381 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	SRP19	P09132	144 aa	Known RBP	10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	CDKN1A	P38936	164 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	SYT8	Q8NBV8	401 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	USF3	Q68DE3	2245 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	TRAV24	A0A0B4J272	114 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	CD24	P25063	80 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	AMMECR1L	Q6DCA0	310 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	ZNF525	Q8N782	197 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	IMMP2L	Q96T52	175 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	GAGE10	A6NGK3	116 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	ATP5I	P56385	69 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	WDR82	Q6UXN9	313 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	MIEN1	Q9BRT3	115 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	SPRR3	Q9UBC9	169 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	FBXL7	Q9UJT9	491 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	RAMP3	O60896	148 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	PRSS2	P07478	247 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	SEMA5B	Q9P283	1151 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	UQCR10	Q9UDW1	63 aa		10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN23-206	ENST00000602307	PMCHL1	Q16048	86 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	MIR17HG	Q75NE6	70 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	TCF24	Q7RTU0	167 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	RAB37	Q96AX2	223 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	IGKV1-12	A0A0C4DH73	117 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	NPIPB6	E9PJ23	425 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	SMAD7	O15105	426 aa	Known RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	IGKV1D-12	P01611	117 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	GPR183	P32249	361 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	GPX4	P36969	197 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	CLDND2	Q8NHS1	167 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	MED13L	Q71F56	2210 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	SAA2-SAA4	A0A096LPE2	208 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	SAA2	P0DJI9	122 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	FOLR2	P14207	255 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	CCL1	P22362	96 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	RPS20	P60866	119 aa	Known RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	GPR82	Q96P67	336 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	KIAA2026	Q5HYC2	2103 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	DOCK7	Q96N67	2140 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	LOC107984156	A0A0G2JMH3	177 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	NTN3	O00634	580 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	ARL17A	Q8IVW1	177 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307	FAM89B	Q8N5H3	189 aa		10.12	□□□□□ -0.79
PTPN23-206	ENST00000602307		C9JCJ5	164 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	PLP1	P60201	277 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	FOXF2	Q12947	444 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	KCNS1	Q96KK3	526 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	FBLN5	Q9UBX5	448 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	F11R	Q9Y624	299 aa	Known RBP	10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	LINC00312	Q9Y6C7	94 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	SAA1	P0DJI8	122 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	GLRX5	Q86SX6	157 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	OR10AG1	Q8NH19	301 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	OR52E5	Q8NH55	327 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	SMIM12	Q96EX1	92 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	C21orf62	Q9NYP8	219 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	MYLK	Q15746	1914 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	TRBV20OR9-2	A0A075B6H5	130 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	C7orf71	A4D174	169 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	VENTX	O95231	258 aa		10.11	□□□□□ -0.79
PTPN23-206	ENST00000602307	C19orf54	Q5BKX5	351 aa		10.11	□□□□□ -0.79

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