RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	NDUFB11	Q9NX14	153 aa		13.24	□□□□□ -0.29
IRF3-231	ENST00000602190	IGHV4-28	A0A0C4DH34	117 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	PRSS29P	A6NIE9	313 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	SCGN	O76038	276 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	CD5	P06127	495 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	HLA-DMB	P28068	263 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	FCGR2C	P31995	323 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	REL	Q04864	619 aa	Predicted RBP	13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	PVRIG	Q6DKI7	326 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190		Q6ZTC4	211 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	NXF2	Q9GZY0	626 aa	Known RBP	13.23	□□□□□ -0.29
IRF3-231	ENST00000602190		X6R8D5	127 aa		13.23	□□□□□ -0.29
IRF3-231	ENST00000602190	IGHV3-21	A0A0B4J1V1	117 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	MARCH11	A6NNE9	402 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190		I3L2K1	104 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	XRCC3	O43542	346 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	MIF	P14174	115 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	MYL9	P24844	172 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	TMEM41B	Q5BJD5	291 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	ZNF818P	Q6ZRF7	136 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	HOGA1	Q86XE5	327 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	BEST4	Q8NFU0	473 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	OR1P1	Q8NH06	330 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	TXN2	Q99757	166 aa		13.22	□□□□□ -0.29
IRF3-231	ENST00000602190	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	PTHLH	P12272	177 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	TFPI2	P48307	235 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	GNG2	P59768	71 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	LGALS9B	Q3B8N2	356 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	TRPT1	Q86TN4	253 aa	Known RBP	13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	LILRB2	Q8N423	598 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	POM121L12	Q8N7R1	296 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	GIMAP1	Q8WWP7	306 aa		13.21	□□□□□ -0.29
IRF3-231	ENST00000602190	HSPG2	P98160	4391 aa		13.21	□□□□□ -0.3
IRF3-231	ENST00000602190	TRAV14DV4	A0A0A6YYC5	116 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	NOTO	A8MTQ0	251 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	NUPL2	O15504	423 aa	Known RBP	13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	GNRHR	P30968	328 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190		Q56UQ5	140 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	TCF24	Q7RTU0	167 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	ZNF367	Q7RTV3	350 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	FAM24B	Q8N5W8	94 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	ZNF114	Q8NC26	417 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	CSNK1G2-AS1	Q8NCQ2	148 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	DMBX1	Q8NFW5	382 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	SLC5A7	Q9GZV3	580 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	TMEM14B	Q9NUH8	114 aa		13.2	□□□□□ -0.3
IRF3-231	ENST00000602190	IGHV3-49	A0A0A0MS15	119 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	DEFB131A	P59861	70 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190		Q6ZR54	194 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	GBGT1	Q8N5D6	347 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	UBAC2	Q8NBM4	344 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	OR51H1	Q8NH63	302 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	CMTM3	Q96MX0	182 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	MS4A6A	Q9H2W1	248 aa		13.19	□□□□□ -0.3
IRF3-231	ENST00000602190	DBX1	A6NMT0	343 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	C4BPB	P20851	252 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	F2R	P25116	425 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	FGF9	P31371	208 aa	Predicted RBP	13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	PAFAH1B2	P68402	229 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	LEMD1	Q68G75	181 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	ST8SIA2	Q92186	375 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	CCDC90B	Q9GZT6	254 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	ZFAND3	Q9H8U3	227 aa		13.18	□□□□□ -0.3
IRF3-231	ENST00000602190	IGKV3-7	A0A075B6H7	116 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	APOH	P02749	345 aa	Predicted RBP	13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	CD74	P04233	296 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190		P0DMU3	169 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	FAM231A	P0DMU4	169 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	FAM231C	P0DMU5	169 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	SPP1	P10451	314 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	MFAP4	P55083	255 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	SCAND1	P57086	179 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	ARPC4	P59998	168 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	C22orf42	Q6IC83	251 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	MORN3	Q6PF18	240 aa	Predicted RBP	13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	SLC25A38	Q96DW6	304 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	GRAMD2B	Q96HH9	432 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	VCX	Q9H320	206 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	RHBDL2	Q9NX52	303 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	OR51B2	Q9Y5P1	312 aa		13.17	□□□□□ -0.3
IRF3-231	ENST00000602190	IGHV3OR16-13	A0A075B7E8	117 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	IGHV3-74	A0A0B4J1X5	117 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	ERVK-16	P61578	105 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	C12orf74	Q32Q52	190 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	AADACL3	Q5VUY0	350 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	TOMM20L	Q6UXN7	152 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	LGALS14	Q8TCE9	139 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	FCAMR	Q8WWV6	532 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	TMEM56	Q96MV1	263 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	GINS3	Q9BRX5	216 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	CELA1	Q9UNI1	258 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	NSG2	Q9Y328	171 aa		13.16	□□□□□ -0.3
IRF3-231	ENST00000602190	SMIM30	A4D0T7	59 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190		K7EQG2	157 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	AQP4	P55087	323 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	TPRA1	Q86W33	373 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	DUSP18	Q8NEJ0	188 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	OR5AP2	Q8NGF4	316 aa		13.15	□□□□□ -0.3
IRF3-231	ENST00000602190	BORCS5	Q969J3	196 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms