RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 HSPB9Q9BQS6 159 aa5.82□□□□□ -1.48
FARP1-239ENST00000602171 SRSF8Q9BRL6 282 aaKnown RBP5.82□□□□□ -1.48
FARP1-239ENST00000602171 MARVELD1Q9BSK0 173 aa5.82□□□□□ -1.48
FARP1-239ENST00000602171 ZNF430Q9H8G1 570 aaPredicted RBP5.82□□□□□ -1.48
FARP1-239ENST00000602171 SERTAD4Q9NUC0 356 aa5.82□□□□□ -1.48
FARP1-239ENST00000602171 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
FARP1-239ENST00000602171 TRAV41A0A0B4J266 112 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 A0A1W2PN81 502 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 SH2D7A6NKC9 451 aaPredicted RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 C15orf61A6NNL5 157 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 SNRPGP15A8MWD9 76 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 INMT-MINDY4F8WBC2 141 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 FCN1O00602 326 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 ATP6V0E1O15342 81 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 IGKV1-39P01597 117 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 IGKV1D-39P04432 117 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 IL6RP08887 468 aaPredicted RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 TRAPPC2P0DI81 140 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 TRAPPC2BP0DI82 140 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 SLC25A6P12236 298 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 CHRNA7P36544 502 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 PJVKQ0ZLH3 352 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 FOXI1Q12951 378 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 TMEM65Q6PI78 240 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 UNQ5815/PRO19632Q6UWF5 114 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 KLHDC1Q8N7A1 406 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 SLC35G3Q8N808 338 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 C3orf56Q8N813 242 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 MINDY2Q8NBR6 621 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 LFNGQ8NES3 379 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 OR5M8Q8NGP6 311 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 GRPEL2Q8TAA5 225 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 ZNF431Q8TF32 576 aaPredicted RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 MITD1Q8WV92 249 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 QTRT1Q9BXR0 403 aaKnown RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 ENY2Q9NPA8 101 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 COA4Q9NYJ1 87 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 FOXA2Q9Y261 457 aaPredicted RBP5.81□□□□□ -1.48
FARP1-239ENST00000602171 ZNF257Q9Y2Q1 563 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 OR51B2Q9Y5P1 312 aa5.81□□□□□ -1.48
FARP1-239ENST00000602171 A0A1B0GU03 582 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 MSGN1A6NI15 193 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 H3BUA1 57 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 IFNA17P01571 189 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 IGKV1-5P01602 117 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OPN1MWP04001 364 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 ELANEP08246 267 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 SULT1A3P0DMM9 295 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 SULT1A4P0DMN0 295 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OPN1MW2P0DN77 364 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OPN1MW3P0DN78 364 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 PROK1P58294 105 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 HSPE1P61604 102 aaKnown RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 ERHP84090 104 aaKnown RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 SMCO1Q147U7 214 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 ECSCRQ19T08 205 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 ANKRD55Q3KP44 614 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 CXorf66Q5JRM2 361 aaPredicted RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 LYZL2Q7Z4W2 148 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OR5AU1Q8NGC0 362 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OR1L6Q8NGR2 347 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 OR52E5Q8NH55 327 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 LHFPL5Q8TAF8 219 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 GPR146Q96CH1 333 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 RBMXL1Q96E39 390 aaKnown RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 NOL4LQ96MY1 436 aaPredicted RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 FYTTD1Q96QD9 318 aaKnown RBP5.8□□□□□ -1.48
FARP1-239ENST00000602171 SLA2Q9H6Q3 261 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 TMEM14BQ9NUH8 114 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 THYN1Q9P016 225 aa5.8□□□□□ -1.48
FARP1-239ENST00000602171 A0A0G2JLM5 398 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 TEX50A0A1B0GTY4 177 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 LINC01548A6NM66 108 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 NPIPB5A8MRT5 1133 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 FAM90A26D6RGX4 464 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 MED6O75586 246 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 SCGB1D2O95969 90 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 HOXB5P09067 269 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 OR9G9P0C7N8 305 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 P0C879 139 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 DEFA4P12838 97 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 SUB1P53999 127 aaKnown RBP eCLIP5.79□□□□□ -1.48
FARP1-239ENST00000602171 OR2B8PP59922 312 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 SPCS3P61009 180 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 NDPQ00604 133 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 PRCDQ00LT1 54 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 NMSQ5H8A3 153 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 GGNBP1Q5YKI7 109 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 C12orf45Q8N5I9 185 aaPredicted RBP5.79□□□□□ -1.48
FARP1-239ENST00000602171 TTC9CQ8N5M4 171 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 UXS1Q8NBZ7 420 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 OR1S1Q8NH92 325 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 TAF15Q92804 592 aaKnown RBP eCLIP5.79□□□□□ -1.48
FARP1-239ENST00000602171 FAM103A1Q9BTL3 118 aaKnown RBP5.79□□□□□ -1.48
FARP1-239ENST00000602171 HINT2Q9BX68 163 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 PLEKHA3Q9HB20 300 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 NDUFA4L2Q9NRX3 87 aa5.79□□□□□ -1.48
FARP1-239ENST00000602171 ZNF355PQ9NSJ1 428 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms