RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 S1PR2O95136 353 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 KRASP01116 189 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 TFPI2P48307 235 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 GABARAPL2P60520 117 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 EWSR1Q01844 656 aaKnown RBP eCLIP7.08□□□□□ -1.28
VRK3-224ENST00000601849 MXD1Q05195 221 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 WT1-ASQ06250 92 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 IDNKQ5T6J7 187 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 LPCAT3Q6P1A2 487 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 ZNF818PQ6ZRF7 136 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 NR2C2APQ86WQ0 139 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 CADM3Q8N126 398 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
VRK3-224ENST00000601849 GVQW1Q8N7I0 195 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 S100A16Q96FQ6 103 aaKnown RBP7.08□□□□□ -1.28
VRK3-224ENST00000601849 TXN2Q99757 166 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 RHPN1-AS1Q9BWJ2 59 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 DNAH10Q8IVF4 4471 aa7.08□□□□□ -1.28
VRK3-224ENST00000601849 IGKV3-7A0A075B6H7 116 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 IGHV3-21A0A0B4J1V1 117 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 IGHV7-4-1A0A0J9YVY3 117 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 CHEK1O14757 476 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 ZNF207O43670 478 aaKnown RBP7.07□□□□□ -1.28
VRK3-224ENST00000601849 GNG7O60262 68 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 GNRHRP30968 328 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 SDC2P34741 201 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
VRK3-224ENST00000601849 ERHP84090 104 aaKnown RBP7.07□□□□□ -1.28
VRK3-224ENST00000601849 TMEM187Q14656 261 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 UBE2UQ5VVX9 321 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 DHRS11Q6UWP2 260 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 CROCCP3Q8IVE0 287 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 OR6F1Q8NGZ6 308 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 OR1P1Q8NH06 330 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 OR4A16Q8NH70 328 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 SLC25A46Q96AG3 418 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 DGCR14Q96DF8 476 aaKnown RBP7.07□□□□□ -1.28
VRK3-224ENST00000601849 RNF2Q99496 336 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 ZNF2Q9BSG1 426 aaPredicted RBP7.07□□□□□ -1.28
VRK3-224ENST00000601849 CHRDL1Q9BU40 450 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 AUNIPQ9H7T9 357 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 EHFQ9NZC4 300 aa7.07□□□□□ -1.28
VRK3-224ENST00000601849 HERC2O95714 4834 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 IGHV3OR16-8A0A075B7F1 116 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 PGLYRP1O75594 196 aaPredicted RBP7.06□□□□□ -1.28
VRK3-224ENST00000601849 DEDDO75618 318 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 DFFBO76075 338 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 RLN1P04808 185 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 CTSGP08311 255 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 PTHLHP12272 177 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 FCGR2BP31994 310 aaPredicted RBP7.06□□□□□ -1.28
VRK3-224ENST00000601849 LPAR6P43657 344 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 TAS2R46P59540 309 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 TMEM41BQ5BJD5 291 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 ZNF773Q6PK81 442 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 STHQ8IWL8 128 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 SPARTQ8N0X7 666 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 DUSP18Q8NEJ0 188 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 MISP3Q96FF7 219 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
VRK3-224ENST00000601849 Q9H521 79 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 TMEM231Q9H6L2 316 aa7.06□□□□□ -1.28
VRK3-224ENST00000601849 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 A0A1W2PS18 150 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 GPR31O00270 319 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 ST8SIA3O43173 380 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 CA1P00915 261 aaPredicted RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 FCER2P06734 321 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 G6PCP35575 357 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 SNCAP37840 140 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 NPBWR1P48145 328 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 NANOS2P60321 138 aaKnown RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 TSPAN5P62079 268 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 H2BFWTQ7Z2G1 175 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 GBGT1Q8N5D6 347 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 OR5H2Q8NGV7 314 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 FCAMRQ8WWV6 532 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 PINX1Q96BK5 328 aaKnown RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 MOB3AQ96BX8 217 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 NARS2Q96I59 477 aaKnown RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 OR10C1Q96KK4 312 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 YTHDF1Q9BYJ9 559 aaKnown RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 NXF2Q9GZY0 626 aaKnown RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 FAM212BQ9NTI7 297 aaPredicted RBP7.05□□□□□ -1.28
VRK3-224ENST00000601849 NSG2Q9Y328 171 aa7.05□□□□□ -1.28
VRK3-224ENST00000601849 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 IGLL5B9A064 214 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 K7EIM0 57 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 XRCC3O43542 346 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 PMP2P02689 132 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 RFX2P48378 723 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 SUB1P53999 127 aaKnown RBP eCLIP7.04□□□□□ -1.28
VRK3-224ENST00000601849 TMEM69Q5SWH9 247 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 TCF24Q7RTU0 167 aa7.04□□□□□ -1.28
VRK3-224ENST00000601849 OR5H6Q8NGV6 325 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms