RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 C20orf85Q9H1P6 137 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 C5orf66Q9H5L9 145 aa7.44□□□□□ -1.22
HIF3A-219ENST00000600879 TRAV6A0A075B6T7 132 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 C3orf85A0A1B0GTC6 90 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 PPP5D1E7EU14 171 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 CRYZL1O95825 349 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 H2AFB2P0C5Z0 115 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 RRASP10301 218 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 F2RP25116 425 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 TAS2R31P59538 309 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 DEFB135Q30KP9 77 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 SLC16A13Q7RTY0 426 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 SPAG16Q8N0X2 631 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 DUSP18Q8NEJ0 188 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 OR52B4Q8NGK2 314 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 PHLDA1Q8WV24 401 aaPredicted RBP7.43□□□□□ -1.22
HIF3A-219ENST00000600879 TMEM230Q96A57 120 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 USMG5Q96IX5 58 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 NAA60Q9H7X0 242 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 NUDT15Q9NV35 164 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 KCNIP3Q9Y2W7 256 aa7.43□□□□□ -1.22
HIF3A-219ENST00000600879 CRYM-AS1A6NIL9 109 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 C2orf70A6NJV1 201 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 SPRY2O43597 315 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 SCAF4O95104 1147 aaKnown RBP7.42□□□□□ -1.22
HIF3A-219ENST00000600879 NDUFB8O95169 186 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 SPDEFO95238 335 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 PTTG1O95997 202 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 ANXA7P20073 488 aaKnown RBP7.42□□□□□ -1.22
HIF3A-219ENST00000600879 VAMP1P23763 118 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 LPAR6P43657 344 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 RHOGP84095 191 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 RGS21Q2M5E4 152 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 SLC25A42Q86VD7 318 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 OR4S2Q8NH73 311 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 CD300LFQ8TDQ1 290 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 TP53RKQ96S44 253 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 RNF5Q99942 180 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 ZC4H2Q9NQZ6 224 aa7.42□□□□□ -1.22
HIF3A-219ENST00000600879 MSGN1A6NI15 193 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 SHOXO15266 292 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 RBFOX2O43251 390 aaKnown RBP eCLIP7.41□□□□□ -1.22
HIF3A-219ENST00000600879 B3GALNT1O75752 331 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 S1PR2O95136 353 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 OR2C1O95371 312 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 HPRT1P00492 218 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 IGLV2-23P01705 113 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 SERPINE2P07093 398 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 OR5AC1P0C628 307 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 ANXA3P12429 323 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 BRWD1-AS2P59051 145 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 UBE2MP61081 183 aaKnown RBP7.41□□□□□ -1.22
HIF3A-219ENST00000600879 DHODHQ02127 395 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 ATP5G2Q06055 141 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 PPP1R1AQ13522 171 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 SP6Q3SY56 376 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 C4orf46Q504U0 113 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 TMEM128Q5BJH2 165 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 OSR1Q8TAX0 266 aaPredicted RBP7.41□□□□□ -1.22
HIF3A-219ENST00000600879 HARBI1Q96MB7 349 aa7.41□□□□□ -1.22
HIF3A-219ENST00000600879 INMT-MINDY4F8WBC2 141 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 SFT2D2O95562 160 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 HRASP01112 189 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 IGHV3-23P01764 117 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 OR4E1P0C645 316 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 OR9G9P0C7N8 305 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 UCP1P25874 307 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 BMI1P35226 326 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 SUPT4H1P63272 117 aaKnown RBP7.4□□□□□ -1.22
HIF3A-219ENST00000600879 TNXAQ16473 311 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 TRIM16LQ309B1 348 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 ZNF585BQ52M93 769 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 C19orf35Q6ZS72 473 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 GALNT14Q96FL9 552 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 TMEM222Q9H0R3 208 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 PLEKHA2Q9HB19 425 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 FAM212BQ9NTI7 297 aaPredicted RBP7.4□□□□□ -1.22
HIF3A-219ENST00000600879 TECRQ9NZ01 308 aaKnown RBP7.4□□□□□ -1.22
HIF3A-219ENST00000600879 COMMD9Q9P000 198 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 MLXQ9UH92 298 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 UBQLN2Q9UHD9 624 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 S4R3C0 116 aa7.4□□□□□ -1.22
HIF3A-219ENST00000600879 PKHD1P08F94 4074 aa7.4□□□□□ -1.23
HIF3A-219ENST00000600879 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.39□□□□□ -1.23
HIF3A-219ENST00000600879 ZNF320A2RRD8 509 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 C9orf170A2RU37 121 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 OR2J3O76001 311 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 DHFRP00374 187 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 CRYGBP07316 175 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 MED14OSP0DP75 135 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 RPA2P15927 270 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 NQO2P16083 231 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 CBLN1P23435 193 aa7.39□□□□□ -1.23
HIF3A-219ENST00000600879 NANOS2P60321 138 aaKnown RBP7.39□□□□□ -1.23
HIF3A-219ENST00000600879 ERVK-16P61578 105 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms