RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CLRN1P58418 232 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 AMTNQ6UX39 209 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 KNL1Q8NG31 2342 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 PMS2P5A8MQ11 134 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 HLA-DQA1Q5Y7H0 255 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 DTX1Q86Y01 620 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 MRPL43Q8N983 215 aaKnown RBP8.15□□□□□ -1.1
NFKB1-212ENST00000600343 FAM168AQ92567 244 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 PRELID3AQ96N28 172 aa8.15□□□□□ -1.1
NFKB1-212ENST00000600343 IGKV1-27A0A075B6S5 117 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 TGFBR3LH3BV60 316 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 MT-CO3P00414 261 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 PRNPP04156 253 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 PPIFP30405 207 aaKnown RBP8.15□□□□□ -1.11
NFKB1-212ENST00000600343 FXYD2P54710 66 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 AKIRIN1Q9H9L7 192 aaPredicted RBP8.15□□□□□ -1.11
NFKB1-212ENST00000600343 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.15□□□□□ -1.11
NFKB1-212ENST00000600343 STARD5Q9NSY2 213 aa8.15□□□□□ -1.11
NFKB1-212ENST00000600343 IGKV1-12A0A0C4DH73 117 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 A0A1W2PQM1 296 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 IGKV1D-12P01611 117 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 KIR2DS4P43632 304 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 RSPO4Q2I0M5 234 aaPredicted RBP8.14□□□□□ -1.11
NFKB1-212ENST00000600343 Q6ZS49 121 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 H1FNTQ75WM6 255 aaPredicted RBP8.14□□□□□ -1.11
NFKB1-212ENST00000600343 NUP35Q8NFH5 326 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 ZNF296Q8WUU4 475 aaPredicted RBP8.14□□□□□ -1.11
NFKB1-212ENST00000600343 GLMPQ8WWB7 406 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 GCM1Q9NP62 436 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 PPP1R32Q7Z5V6 425 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
NFKB1-212ENST00000600343 KMT2EQ8IZD2 1858 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 KIR2DS1A0A191URI9 304 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 IGLV3-1P01715 115 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 KIR2DS1Q14954 304 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 Q8N7P7 452 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 TMEM178AQ8NBL3 297 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 ZNF355PQ9NSJ1 428 aa8.14□□□□□ -1.11
NFKB1-212ENST00000600343 NHP2Q9NX24 153 aaKnown RBP8.14□□□□□ -1.11
NFKB1-212ENST00000600343 E9PLD3 99 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 PVRP15151 417 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 RBM11P57052 281 aaKnown RBP8.13□□□□□ -1.11
NFKB1-212ENST00000600343 MFAP5Q13361 173 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 FHL3Q13643 280 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 ASPHD1Q5U4P2 390 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 ZADH2Q8N4Q0 377 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 PTH2Q96A98 100 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 WDR83OSQ9Y284 106 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 ZG16O60844 167 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 NMUP48645 174 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 Q8TCH9 128 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 IL1F10Q8WWZ1 152 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 RTTNQ86VV8 2226 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 IGKV1-6A0A0C4DH72 117 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 CHEK1O14757 476 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 NCR2O95944 276 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 CD24P25063 80 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 FKBP1BP68106 108 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 TMEM42Q69YG0 159 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 TRAT1Q6PIZ9 186 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 TMEM92Q6UXU6 159 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 NHLRC2Q8NBF2 726 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 POLDIP2Q9Y2S7 368 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 LOXL2Q9Y4K0 774 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 CSDC2Q9Y534 153 aaKnown RBP8.13□□□□□ -1.11
NFKB1-212ENST00000600343 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
NFKB1-212ENST00000600343 HSPB6O14558 160 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 OPRK1P41145 380 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 FASLGP48023 281 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 ZNF138P52744 262 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 LCNL1Q6ZST4 164 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 CRIPAKQ8N1N5 446 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 PPP1R35Q8TAP8 253 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 DUSP13Q9UII6 198 aa8.13□□□□□ -1.11
NFKB1-212ENST00000600343 THADAQ6YHU6 1953 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 TRAV25A0A0B4J276 109 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 A8MWL6 223 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 DIAPH2-AS1Q14236 149 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 Q6ZR03 302 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 FGFRL1Q8N441 504 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 LIN7CQ9NUP9 197 aaKnown RBP8.12□□□□□ -1.11
NFKB1-212ENST00000600343 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 IGLL5B9A064 214 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 ZBTB34Q8NCN2 500 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 AREGP15514 252 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 PRSS12P56730 875 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
NFKB1-212ENST00000600343 PRTFDC1Q9NRG1 225 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 OBP2AQ9NY56 170 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 IDI2-AS1Q9NZ38 188 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 COL4A2P08572 1712 aa8.12□□□□□ -1.11
NFKB1-212ENST00000600343 KIR2DS5A0A0G2JLQ3 304 aa8.11□□□□□ -1.11
NFKB1-212ENST00000600343 A0A0G2JNG1 304 aa8.11□□□□□ -1.11
NFKB1-212ENST00000600343 FOXH1O75593 365 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms